CI01000013_08229647_08258878 (TBXAS1)


Basic Information

Item Value
gene id CI01000013_08229647_08258878
gene name TBXAS1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 8229172 ~ 8258878 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_08229647_08258878.mRNA
GCAACCAGGGGCATCACTAAACCCATGAGCGACAGTCTAGTCATGCTGAAGGACGAACAATGGAAACGAGTGCGCAGCATCCTCACACCGACCTTCAGTGCTGCCAAGATGAAAGAGATGGTTCCCCTCATCAACACGGCCACAGAAACGTTACTGAGAAACCTGAAGAGCCATGCAGAGTCCGGTAATAGCTTCAACATCCACAAGTGTTTCGGCTGCTTCACAATGGATGTAATTGCCAGTGTTGCATTTGGTACACAGGTGGACTCTCAGAACAATCCAGATGACCCCTTTGTGCACCATGCCTCCAAATTCTTCGCTTTTAACTTCTTCAAACCCCTCATGATATTAATTTTGGCATTTCCATATCTCCTTCAGCCACTTTCTGCCCTACTTCCCAATAAAACGAGGGATGAGATGAATTCCTTTTTTATCAAATGTATCCAAAAGATGATTAAACAGAGGGATGATCTTCCCCCAGAACAGCGACGGCGAGACTTCCTGCAGCTGATGCTGGATGTCAGGGCCAGCAACAAACATTTGTCTTTGGAGCACTTTGATGTGGTCAACGATGCCGATGAGCAGACTTGCACCGAACAGGGGATGGACGACGGACAAGAAGGCGGGCCTGGAAACGAGTCCACCAAGCGCGTCCAGCAGAAGAGAATGATGACAGAGGATGAGATTATCGGTCAATCCTTCATCTTCCTGCTGGCCGGCTATGAGACGAGCAGCAACACACTAGCTTTCGTGTGCTACCTGTTAGCGATCCATCCAGAGTGCCAGAAAAAACTCCAAGAAGAAGTGGATGAATTCTTCAGCAGACACTATAAGCGGAGCAGGATTGAGCTACAATACGTGAGGCTGCATACGTCATACTCAGTCCTCAAACCGAGATATTTCAATCCCACCTACAAGCAGGAGACAGCAGATTACACTAATGTCCAGGAGCTGAAGTATTTAGAGATGGTCATATGTGAGTCGCTCAGACTCTACCCACCTGCATTCAGGGTTGCAAGAGATGTTGAGCAAGACACTGTCGTGAATGGCCAGTTTCTGCCTAAAGGAGCATCTCTGGAAATTGCTACAGGTTTTCTTCACTATGACCCAGAGCATTGGCCCGAACCTAAGAAATTCATCCCGGAGAGGTTCACTCCAGAAGCCAAGGCCAGCCGGCACCCGTTTGTGTATCTGCCTTTTGGAGCGGGGCCACGCAGCTGTGTGGGTATGAGATTGGCCCAGCTGGAGATTAAAGTGGCTCTGGTTCACATATTTAGGACGTTTAACGTCGTGGCCTGCGAGGACACTGAGGTTCCTCTGGAATTAAAGTCGAACACCACCCTCGGACCCAAGAATGGTGTTTTTGTCAAAATCACCAAGAGGGAGAATTTTGAGGATGAGTCCTGATCTGGTTTCAGTTCTCAGCTGCACAGTCTGATTCTAATCAAAATATTTAGAATCAAATTACTTATTCTGAAGTGATCTGACAAATATATCTGTGCTTATTGTTTGATTAAAACTGATTTCAACACTATTCATTTACAATGAAGGCACAAATGTAAGCAAGAGACAGTCTCAGCTAAAAGTCACATACTGTATAGTATATTTGATAAAAGGAACTGGGATGCGACGTCTCACCTTATTGCGCACAAGGTATTTGATTTTATGTTGATTATACTGTTGTGTATTTTATATATTGCATAAATATACAGTTCATTATCAGAATAATGAGATTATTAAGGTTCAGGGTATACAAAGTGCTGTGGCATTAGCTTAGCTCATTAAGTTGAATGTGATTGTTTACTCAGGGTATGAACAGTAAACTTTGAAGACATATTCAAATGATTTGAAATATTAAAAGTATAACAGATCACTAAATAAA

Function

symbol description
tbxas1 Predicted to enable thromboxane-A synthase activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in heart. Human ortholog(s) of this gene implicated in Ghosal hematodiaphyseal syndrome; cerebral infarction; and platelet-type bleeding disorder 14. Orthologous to human TBXAS1 (thromboxane A synthase 1).

GO:

id name namespace
GO:0004497 monooxygenase activity molecular_function

KEGG:

id description
K01832 TBXAS1, CYP5A; thromboxane-A synthase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_08229647_08258878.mRNA True 1882 mRNA 0.44 10 8229172 8258878

Neighbor

gene id symbol gene type direction distance location
CI01000013_08098898_08099508 UQCRFS1 coding downstream 129664 8098758 ~ 8099508 (-)
CI01000013_08090811_08094235 NA coding downstream 134868 8089673 ~ 8094304 (-)
CI01000013_08080409_08086491 TAT coding downstream 141618 8080360 ~ 8087554 (-)
CI01000013_08072726_08076570 NA coding downstream 151981 8072579 ~ 8077191 (-)
CI01000013_08059677_08060143 COTL1 coding downstream 169029 8058968 ~ 8060143 (-)
CI01000013_08308180_08308362 NA coding upstream 48973 8307851 ~ 8309913 (-)
CI01000013_08311120_08328130 NA coding upstream 52107 8310985 ~ 8328343 (-)
CI01000013_08418098_08441411 NA coding upstream 158959 8417837 ~ 8441751 (-)
CI01000013_08555865_08573521 FGD4, FGD4A coding upstream 296330 8555208 ~ 8573521 (-)
CI01000013_08616374_08648611 BICD1A, BICD1 coding upstream 357326 8616204 ~ 8648611 (-)
G83465 NA non-coding downstream 149963 8078814 ~ 8079209 (-)
G83471 NA non-coding downstream 244570 7982184 ~ 7984602 (-)
G83477 NA non-coding downstream 254743 7972740 ~ 7974429 (-)
G83475 NA non-coding downstream 271116 7956962 ~ 7958056 (-)
G83211 NA non-coding downstream 329004 7868770 ~ 7900168 (-)
G83620 NA non-coding upstream 191961 8450839 ~ 8451904 (-)
G83658 NA non-coding upstream 225690 8484568 ~ 8484769 (-)
G83662 NA non-coding upstream 237165 8496043 ~ 8496249 (-)
G83663 NA non-coding upstream 237557 8496435 ~ 8496691 (-)
G83677 NA non-coding upstream 270274 8529152 ~ 8529368 (-)
CI01000013_07339918_07367774 NA other downstream 846812 7339709 ~ 7367774 (-)
CI01000013_05883498_05884071 CHTF8 other downstream 2344800 5882049 ~ 5884071 (-)
G81547 NA other downstream 2485134 5739526 ~ 5744038 (-)
G81032 NA other downstream 3478611 4748809 ~ 4750561 (-)
CI01000013_04561253_04567647 MAP2K1 other downstream 3670269 4560340 ~ 4567647 (-)
CI01000013_09309438_09335834 MICAL3A other upstream 1048158 9307036 ~ 9336077 (-)
G85170 NA other upstream 2220983 10479861 ~ 10480700 (-)
CI01000013_10564288_10569141 NA other upstream 2304581 10563459 ~ 10569290 (-)
G85188 NA other upstream 2333326 10592204 ~ 10595337 (-)
G85401 NA other upstream 2776154 11035032 ~ 11035466 (-)

Expression


Co-expression Network