CI01000013_08311120_08328130


Basic Information

Item Value
gene id CI01000013_08311120_08328130
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 8310985 ~ 8328343 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_08311120_08328130.mRNA
AGACCATTACAGTAACAGTATCGTTACACTCCTGCTGCCACCCACAAGCATTTACCAGCACCACTAGTAAAACATTATTTTATTTGGCACTCTTTGGAATGTCTGAGGTACAATAACAAACCATGTCATTGTCTGTTGCGGTGTGTATGTGTACCTGCGAATATATGTTTTGCAGGTTTTTGCTGCACTTCAAAAGAACAAGACCTGAGCAACATGCCAGAGTCTAACCACAGAGCCCAGCCAGGATCCAGAGCCCACAAGGGAACAAGTCCCAGAGTTGACGCTCAGCATCCACCCAGTTGTATCAGCTTCCATCCATCACGTAGGAACCTCGACCTCATTCTCCCTCGCACTCTTGCTATGTCGTTCATGGTCATGAAGTTTGCAAGGCGCACATCAAAAAGTGGGGCAGACTCTCTCAGCTCTGTTCTGGCTGTCTGGGGCTTTGAAGTCCTTTGGTTATCAGCCAAGCGTGTCACGCTACCTGCAGCCATCTGTGAAGAGCCCACAAGACAGGTTGTCCTGGTCCTCACATCAGGCATTTATCAACATGTCAGTGTGGGTTACGAGGCCAAGAGCCAAGACTCCTCTGGCTCAGTCCCATACGGAAGAGTAATCTGGGGCCAGAGCGTTGAGCCTGCACCACAGCGCTCCACAAAGACACATCAGTGCAGGGGAAAAGGCAACAACAAAGAGCTCTCACTATGGCCTGGCATTACAAACGTCTCCACGGACAGTCTGTACCCTAAACTGGAGCAGTAACAGATATTTATTCACAAACTGAAAGGTCTTTTACTCCTGCTTTTTGAAAAGAGCTCAATGCAGCGCGCATGTGCCTTAGCGACACAATACATGCATCTGACAGCCATGAGATGAGCAGAGGAGTCCGTAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_08311120_08328130.mRNA True 897 mRNA 0.48 4 8310985 8328343

Neighbor

gene id symbol gene type direction distance location
CI01000013_08308180_08308362 NA coding downstream 1072 8307851 ~ 8309913 (-)
CI01000013_08229647_08258878 TBXAS1 coding downstream 52107 8229172 ~ 8258878 (-)
CI01000013_08098898_08099508 UQCRFS1 coding downstream 211477 8098758 ~ 8099508 (-)
CI01000013_08090811_08094235 NA coding downstream 216681 8089673 ~ 8094304 (-)
CI01000013_08080409_08086491 TAT coding downstream 223431 8080360 ~ 8087554 (-)
CI01000013_08418098_08441411 NA coding upstream 89494 8417837 ~ 8441751 (-)
CI01000013_08555865_08573521 FGD4, FGD4A coding upstream 226865 8555208 ~ 8573521 (-)
CI01000013_08616374_08648611 BICD1A, BICD1 coding upstream 287861 8616204 ~ 8648611 (-)
CI01000013_08732651_08797549 TMTC2 coding upstream 404308 8732651 ~ 8797549 (-)
CI01000013_08950324_08962808 NA coding upstream 621635 8949978 ~ 8962808 (-)
G83465 NA non-coding downstream 231776 8078814 ~ 8079209 (-)
G83471 NA non-coding downstream 326383 7982184 ~ 7984602 (-)
G83477 NA non-coding downstream 336556 7972740 ~ 7974429 (-)
G83475 NA non-coding downstream 352929 7956962 ~ 7958056 (-)
G83211 NA non-coding downstream 410817 7868770 ~ 7900168 (-)
G83620 NA non-coding upstream 122496 8450839 ~ 8451904 (-)
G83658 NA non-coding upstream 156225 8484568 ~ 8484769 (-)
G83662 NA non-coding upstream 167700 8496043 ~ 8496249 (-)
G83663 NA non-coding upstream 168092 8496435 ~ 8496691 (-)
G83677 NA non-coding upstream 200809 8529152 ~ 8529368 (-)
CI01000013_07339918_07367774 NA other downstream 928625 7339709 ~ 7367774 (-)
CI01000013_05883498_05884071 CHTF8 other downstream 2426613 5882049 ~ 5884071 (-)
G81547 NA other downstream 2566947 5739526 ~ 5744038 (-)
G81032 NA other downstream 3560424 4748809 ~ 4750561 (-)
CI01000013_04561253_04567647 MAP2K1 other downstream 3752082 4560340 ~ 4567647 (-)
CI01000013_09309438_09335834 MICAL3A other upstream 978693 9307036 ~ 9336077 (-)
G85170 NA other upstream 2151518 10479861 ~ 10480700 (-)
CI01000013_10564288_10569141 NA other upstream 2235116 10563459 ~ 10569290 (-)
G85188 NA other upstream 2263861 10592204 ~ 10595337 (-)
G85401 NA other upstream 2706689 11035032 ~ 11035466 (-)

Expression


Co-expression Network