CI01000013_08418098_08441411


Basic Information

Item Value
gene id CI01000013_08418098_08441411
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 8417837 ~ 8441751 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_08418098_08441411.mRNA
AGCGAGAAGAAAGAACTACAGGGACAGTGAAGTAATTATCATCACAAAAGGAAACAGTAAGCTACTCTATTTCGAGCTCTTCATGGCCACACCAATAATAAAATAACGGTTATGACCTATTGAAGACTTCCTCTACAAACAACAAATGAAGTGTGTTGCATGATGCTTTCAAAATAAAACACAAAAGGGATCTAAAATTAAACGAAACTGCAGCAGAAACAGGATTATAGTCGATGTCAGTATGTCTTTCCGTCTGTCTCTCTATCTATGTCTTTGTGAACAGGATGACGTCTTAGGCTGAAACCGCAAGGAGGCTGAAAATGAGATCAAACCCATATAAATGATTCAGTTTAGCACACCCAAATGTAATTTGCTCCTCCCTAAACTCCTGTCCAGTGCAAGAGAGACGCCTGCGCATCAAAGACATGCTGAATTTCTTTGGTGGGAAGAACCAAAACTCCTTAAATGCCAGCGGAGTCCCAATTTGGTCGTACAGGTCGGTCCCTGTGAGGTGAGACAGACTGGAGACTACAGATCAGTGCAGTCAGAAATGGCTCCTTCCGGAATGGAATGTTTTATGGGAGTATCATCGAAGGAGCCTTTCTTAACTGTGTGCTTGAATGAGCATCCAACTTAAGCTTAAACAAACATACAACAAAAACATCTATTGACATCCTACGTCATAACACACAGCTTAATGAATCAATCTGACAAGCTATCAAACTGAAGGCTCGGGTACAACGTAACTGGTGTGAGATCTTGGCTGAGCACTTGGACAAAGTCTATGCTTTCTACCAGACGAGGGTCCACATATGAATACTAAACATCACAGTTACATATCGACCACCAGAAATCAAACAAATGATGCTTGACATATAACATAAAAAAAAAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_08418098_08441411.mRNA True 898 mRNA 0.40 2 8417837 8441751

Neighbor

gene id symbol gene type direction distance location
CI01000013_08311120_08328130 NA coding downstream 89494 8310985 ~ 8328343 (-)
CI01000013_08308180_08308362 NA coding downstream 107924 8307851 ~ 8309913 (-)
CI01000013_08229647_08258878 TBXAS1 coding downstream 158959 8229172 ~ 8258878 (-)
CI01000013_08098898_08099508 UQCRFS1 coding downstream 318329 8098758 ~ 8099508 (-)
CI01000013_08090811_08094235 NA coding downstream 323533 8089673 ~ 8094304 (-)
CI01000013_08555865_08573521 FGD4, FGD4A coding upstream 113457 8555208 ~ 8573521 (-)
CI01000013_08616374_08648611 BICD1A, BICD1 coding upstream 174453 8616204 ~ 8648611 (-)
CI01000013_08732651_08797549 TMTC2 coding upstream 290900 8732651 ~ 8797549 (-)
CI01000013_08950324_08962808 NA coding upstream 508227 8949978 ~ 8962808 (-)
CI01000013_09007324_09008538 NA coding upstream 565506 9007257 ~ 9008749 (-)
G83465 NA non-coding downstream 338628 8078814 ~ 8079209 (-)
G83471 NA non-coding downstream 433235 7982184 ~ 7984602 (-)
G83477 NA non-coding downstream 443408 7972740 ~ 7974429 (-)
G83475 NA non-coding downstream 459781 7956962 ~ 7958056 (-)
G83211 NA non-coding downstream 517669 7868770 ~ 7900168 (-)
G83620 NA non-coding upstream 9088 8450839 ~ 8451904 (-)
G83658 NA non-coding upstream 42817 8484568 ~ 8484769 (-)
G83662 NA non-coding upstream 54292 8496043 ~ 8496249 (-)
G83663 NA non-coding upstream 54684 8496435 ~ 8496691 (-)
G83677 NA non-coding upstream 87401 8529152 ~ 8529368 (-)
CI01000013_07339918_07367774 NA other downstream 1035477 7339709 ~ 7367774 (-)
CI01000013_05883498_05884071 CHTF8 other downstream 2533465 5882049 ~ 5884071 (-)
G81547 NA other downstream 2673799 5739526 ~ 5744038 (-)
G81032 NA other downstream 3667276 4748809 ~ 4750561 (-)
CI01000013_04561253_04567647 MAP2K1 other downstream 3858934 4560340 ~ 4567647 (-)
CI01000013_09309438_09335834 MICAL3A other upstream 865285 9307036 ~ 9336077 (-)
G85170 NA other upstream 2038110 10479861 ~ 10480700 (-)
CI01000013_10564288_10569141 NA other upstream 2121708 10563459 ~ 10569290 (-)
G85188 NA other upstream 2150453 10592204 ~ 10595337 (-)
G85401 NA other upstream 2593281 11035032 ~ 11035466 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_012649 NA non-coding NC_007129.7 CM002902.2 12452154 ~ 12462510 (+)