CI01000013_10916049_11031034


Basic Information

Item Value
gene id CI01000013_10916049_11031034
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 10913695 ~ 11031159 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_10916049_11031034.mRNA
ATATATAAAGACTACTGAAACCTCAGTGACTGCAGCAACAAATATTGCATATGCTACCCTTTTTCTGTTTTTTTTTTTTTTACATTGTCTGTGATAAATGTTTGCAGTTGCCCTCGTGAAAAAAACATAATCAGTGGTGAAACATCCATCGCTAAAGCAGGGTTGCCAGGTTTTCACAACAAAACCCGCCCAATTTCTACTTAAAACTAGCCCAAAACTAGCCCAGTCACGTTTCAAGGGGGGTCCCCTGGTAAAACTCACATTCCGAGGGGTAAAATCTGCTTTTTGGCAGGGTTCCCCTTGGTAAAATTTGCATTCCAGGGGCTAAATATCATGTTATTTGGGGTCGCTTCAACCCGCGGACATGAAAAACAGCAGCAGTGTTAAAGTAGCCCAATTCCGTCGGAAGACCGCGGACTTGGCAACACTGCTCTAAAGTCTCATGCATGGTGAATCTACTCTAGTTTGCATTGTCACTGAAAAGCAGTGGAGACATGCTAGCAAAAATAAGTGCAGTCTGAACAGAAAAAAAATCAGACAATTTTTTAAAGTACAATTTAAACAGTAGGTCTAAAAAATCTAATTTTCCTTTCAAAATAATAATTAAAAAACTGTAGAGTCTTGGCTGTTGACACTTTGGGCAAGTAAGCAAGCACCTAGCAAGCACCCATAACCAGGGGTGTAGCCATCGTGTCAGAAGTGAGGGGGACAGAAATGTCAGTTTTATCTAACCTTTGTCTAATTGACAGATTTTTTTTAATTATTATTATTATTTTATTACTTTTAATTCAAAATCAATTTGCTTTTAATAAGAAATCAAATACACTGCTAAACAATAAGTCTCTTCTGCTCACCAAGGCTGGATTTATTTAATCAAAAATGCAATAAAAAAAACAGTAATATTGTGAAATAGTATTACAATTTAAAATAGCTGTTTTCTATGTGAATATATTGTAAAATGTACAATATATGTCGTCAAAGCTGAATTTTCAGCATCGTTACTCCAGTCTTCAGCGTCACATGATCCTTCAGAAATCATTCTAATATGCTGATTTGCTGCTCAAGAAACATTTCTTATTATTATCAATGTTAAAAACAGTTGTGCTCCTTCATATATTTGTGGAAACCATGATACCATTAATTGTGGTAAGATTAAAAAAGAGAAATTAATACTTTTATTCATCAAGGATGCATTAAATTTATCAAAAGTGACAGAAGACATTTATAATGTTACAACATATTTCTATTTAATTAATGTTAATGAATTAATGTAATAAATTCAAATAAATTAACTTTCTATTCATCAAAGAATCCTGAAAAAGTAAATGTATCATGGTTTACACAACAATTTTAAGCAACTGTTTTCAACACTGATAATAATCATAAATGTTTCTTGAGCAGCAAATCAGCATATTAAAATGATTTCTGAAGGATCATGTGACACTGAAGACTGGAGTAATGATGCTGAAAATTCAGCTTTGCATCACAGGAATAAATACATTTTAAAATATATTCATATAGAAAACAGCTATTTTAATTTGTAATAATATTTCATAATATTACTGTTTTTACTGTATTTTTGATTAAATAAATCCAGCCTTGGCAAGCATAAGAGAATTCTTTCAAAAACATTAAAAAGGCTGTCAGTTAGCACTGCATTATTCAAATACTTTATTGTCAATAAATACCTTAAGATGGCTTGAAAAGCATACATAATCCATATCTTGTCGCAATCGTGTTAATTGTCTTCACGTTTCATCAGTCAAAACGTTGGTTAAGAATAAAACAACAGGTCATGCATAGACTATCTTGTCTCTTTGAATTTAAATCTAGATTTATTCGCATTGGCCTCTATGTGAACACACTTGCCCGAAAAAAGCGCGGGGGGTGAATGTACGTTTTATTAAAAGTGCGGGAGACACGTCCCCCCCCGTCCCCCGCATATTCTACACCCCTGCCCATAACCCCTTAGCACCTGTCCTGTTTACTATTTACAACACCTTAGTTATTACACCTTAGTCAACACTCATTTTCTCCATAGAATGTCAAAATCTAGTCATGGACTGTATGTGCATTGCAGTGTTAATTATGTTACATTAGGGGATGCTATATATGTGTGTGAGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCCATTGAGGAGTTTTCCATGTTATCACAGTTTAGTCTTGCTTGACTCATGTTTCTCAGTTGGGGGTGTGTGTTCAAGGGAAAAGACCAATCTGTTGAGATCTGTCCTTTGAGGCTCACACATACACACATTCTCTCCATTGCTCCTTCCTTCACTTACACGAAGAGGGTGTGGTGGCATATAGAAAAATGAACTTCCTGTCTGCAATCCTCGCATGGCATCGTAACGGATGGGTTTACATCACAGAACCCAATCTCACTCTCGGAGAACATCAGGAAATAGTTCTCTCTCCAACACAACGCCAGAGAAAGCACTTATTTTTGAAGGAAAGGAATAGAAGGGACAGGCTTTATCACCAACAGATTAAAAATAGAGAAGGGAGTTTGAGGAATGACATTCGGTCTCGATCATCGAGTACTGGTGTCAGTATGAAAGGTTTGAGCACTTCTGTAAACATTAGCATAGCGGCAAGTGTCGTTGCCATTGTAGCAATTGGGACTGTTAGCATAGCGCTGTCAGTTTTTTGTTCTGCAGCTTGGATATTGGCAGCCCACTGCAGCAATTTAGCAAAGACTGAATATAGTTGCTTTTGTTCTTTGCTTGTGTATAGTCGAAGACGAAGCCTATCTTCACATAACAGCAATGTGATGACAGGGTCATTGGAGTCAGTTAGCGGATGGAGTCGAGTTATGCCTGAACTTCGTGCTCTTGAGGTACAACCTTTTGCAACAGAAAGAGACAAACATTCTGGATTATTCTGTTCAAAGTCTGCTCGTAATCAAGAGGCTCAGAGCTCATGCCCTGCGGCTGTGCCTCAGATTCTCCATCTGTTTCAATTAAATGGACTTTGCAAGGTGCTTGACAGCTGTGTTGATCGCAGTGTGACAGAGATCAGTTTTAAGGCAAGGAAGTACCTGGGCTATCCCACAGTCTCCTGCAGCCGAAGTGCTATTTATAGTGTGCATCATGCTATGAGGAACAGATGCACCAGCCGGGGGGACAGCTCCCGCTCTCCGCACGCCGACGTTTGCAGAGCGCCGGACGGCCCCATGGAGGAACCCCAGGGCAACACACTGGTCGTCCGCATAGGCATCCCTGACCTGCAGCAAACGGGACTTTTTCCCGCCTGTCTCGAGGCTGTCAGACTTGTCAGTTTGGTTGCAGCGTATGGTACCGTGTCCCCGGGGCCCTCTCGAGCGGCATATGGTGCTGATGGATATGAGAGTGCAGTGTTGAAGTGCAGTTACTCACCTGTTCCTATTGGACAGATACAGATTAAAAATAAAAAGTGCACTTTTTGGAATCCTCCATTGACATCTAAATTCAGGTTCTTTATTCAGTATTTTGCAAAGCTGCCTTTGGCAGTGATTACAGCTGTGAGACTTGAGTAGGCTGTGAGACTACCGGATTTGCAGAACTAGATTTGGTCAGTTTTTCCTGTCTCCTTCATGTAGATGCTTTGTGGATCATCTGCGAACTGTAATCTCAAGGTCTCTGAACACATTTTCTGTGGGGA

Function

NR:

description
Unknown (protein for IMAGE:8993824), partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_10916049_11031034.mRNA True 3682 mRNA 0.39 11 10913695 11031159

Neighbor

gene id symbol gene type direction distance location
CI01000013_10865753_10884937 MAPK8IP2 coding upstream 27394 10865753 ~ 10886301 (+)
CI01000013_10821530_10827412 SEPHS1, SEPHS1.L coding upstream 85718 10821530 ~ 10827977 (+)
CI01000013_10808688_10819703 NA coding upstream 93770 10808688 ~ 10819925 (+)
CI01000013_10756927_10790192 FRMD4A coding upstream 123206 10756927 ~ 10792761 (+)
CI01000013_10586449_10594082 NA coding upstream 319253 10585818 ~ 10594442 (+)
CI01000013_11063977_11172626 NA coding downstream 32818 11063977 ~ 11172634 (+)
CI01000013_11224779_11252341 SHANK3A, SHANK3 coding downstream 193539 11224698 ~ 11253004 (+)
CI01000013_11271292_11274155 NA coding downstream 239447 11270606 ~ 11274754 (+)
CI01000013_11287928_11292308 NA coding downstream 256769 11287928 ~ 11293107 (+)
CI01000013_11326503_11335221 NA coding downstream 295344 11326503 ~ 11335514 (+)
G84445 NA non-coding upstream 2255 10911173 ~ 10911440 (+)
G84444 NA non-coding upstream 8267 10905185 ~ 10905428 (+)
G84383 NA non-coding upstream 63591 10841716 ~ 10850104 (+)
G84410 NA non-coding upstream 105732 10807309 ~ 10807963 (+)
G84473 NA non-coding downstream 15216 11046375 ~ 11046640 (+)
G84437 NA non-coding downstream 96419 11127578 ~ 11128950 (+)
G84486 NA non-coding downstream 106734 11137893 ~ 11138221 (+)
G84425 NA non-coding downstream 222453 11253612 ~ 11256464 (+)
G84492 NA non-coding downstream 253144 11284303 ~ 11284657 (+)
G84250 NA other upstream 697733 10215127 ~ 10215962 (+)
G84215 NA other upstream 834359 10076454 ~ 10079336 (+)
G84194 NA other upstream 876902 10030608 ~ 10036953 (+)
G84005 NA other upstream 1311460 9601611 ~ 9602235 (+)
G84768 NA other downstream 1138830 12169989 ~ 12170818 (+)
G84790 NA other downstream 1153783 12184942 ~ 12201975 (+)
G84864 NA other downstream 1333890 12365049 ~ 12375905 (+)

Expression


Co-expression Network