ddx51


Basic Information

Item Value
gene id ddx51
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172275.1
NCBI id APWO02001873.1
chromosome length 651960
location 590353 ~ 605255 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007260160.3
CCGGTGGTCTATCGCTCTCATTGCTACACTGATGTCATCATTACGCGACTGTCAACAACACCGTGCTCACATGGCTCTCCTCAGCCTGAGCTAACAGCACATTTCTAGACTTTAATCAGCTGGAGTTCCGCTGATTCTGCTGTTAAAACTAACGCTGTGTCTCTGCTGGGGCTGGACGTGGATTTCTACAATGGCTCTGTTTACTATAAACCGATATCTGGGAGACGAGGAGGAAAAGGAATCGACCAGCGAGTCACGATCCAAAGCCCTGCTGGCCAAGCTCCAGAAACAAGCGAAGGCAAGAGAGCAGCAGAGTCTCGCTACTAAAGAGCAGCTTACTGTCCAAGACGCTGACACAACTCAGATCACCTcaggaaagaagaaaagaaaaccggaaaaagtagaagaagaagagaataaACAGcacaagaagaaaaagaagaggaaagagAAGGAGGAAAGCACTGAGCAGCTGGAGGACGCTAATGGGATATCTGTTTCTGTGGAGGCTGCTGAGAAAGCCATAACTGGTACTTTaccaaagaagaagaagataaagGACAAAAACAAGGCAGTTATCAAGGAGGAGGAACAAGACACAAATCATCCATCTGAAGAGAATGCTGAAGCAGTGGAGGAGACTACAGGTGATGGAGTCGAAGCCAAGGAAAGCCAGGAAACTGCCAATGGCCACCCTGATCCTTCAGACACAGAGCCAGGGAAGATCTCCTCTGACAACAGCTTCCAGATCCTGGGTGGATATATGAAAAAGAGAGTACAAAAGGTCCAGAGAGTCCTGCCTAAGTGGCTGGCTGAGCCGGATATGATTGAGAAAGATATTAAAAGTAATCTGGTCACTCTGAGTGATGTAGCAGGCATCTGTCCAGCGCTACAGAAGAAGCTGGAGGCCAAGGGGATCCATAGCTTCTTCCCAGTTCAAGCTGAGGTAATTCCTGCCATCTTGGAGACTGTGAATTCAGGGCTGCTGATTGGTCAAGGTGGCTACAGGCCCAGAGACATCTGCGTTTCTGCTCCTACAGGAAGTGGAAAGACACTGGCGTTTGTTATACCTGTCATACAGGCGCTGATGATGCGAGTGGTGTGTGAAGTTCGCGCCCTGGCCGTGTTACCCACCAAAGAGCTTGCAGAGCAGGTGTACAAGGTTTTCTGCTCTTATGCTGAAGGAACTGATCTGAAAGTGGTCATGGCTGCAGGGCAGAAATCTTTTGCTGCAGAACAGGCAACCCTTACAGAAACCAGGGGCAGGAGGTGTCGCAGTCTAGCAGATATAGTAGTAGCTACTCCCGGCCGACTGGTGGATCACATTAACAAAAACGAGAGCTTTTCTCTCCAACACCTTCGCTTTCTGATCATTGACGAGGCAGACAGGATGATCGACAGCATGCACCAGGCCTGGCTCAATCAGGTCATCAAAGCAGTCTATAAAAGTGGGAGTGGCACAGACACATCAGTTTTCAAGAGGGTGGAGCCAGGCCCAATAACAGTAGCAAGtctgtcCGTCCCTCAGATGCCACTGCAGAAGCTTCTCTTCTCAGCCACTCTGACCCAGAACCCAGAGAAACTCCAGCAGCTGGGGCTCCACCAGCCACGGCTTTTCAGCTCCACGCACACGTCCACACAAAACAGCACACACACCGAGGAGAAATTCGACTTCCCCCAGGGTCTCACGGAGTATTATGTTCCCAGCACTATGAACAAGAAGCCTCTCCTCATCCTCCACTTCCTGCTCCGGCTGAAGTACAAGCCCGTCTTGTGCTTCACAAACTCCAGAGAAGCTGCACACAGgctCTTCCTGTTGTTGAAGTTCTATGGAGGAGTGGAAGTGGCTGAATTTTCCTCCAGACTCAGTccgacagaaagacagaaaactcTGAAGAGTTTTGAACAGGGAAAGATTGCAATGTTGATCAGCACTGATGCTGCCGCCAGGGGGATCGATATAAAGGGAGTTAAATGCGTCATTAATTATGATGCACCACAATACATCAGGACATACATCCACAGggTGGGAAGGACAGCAAGAGCAGGACAAGCTGGAGTGGCCTTCACGTTCCTCTTAGCAATACAGATGAAAAGGTTTCAAAAAATGTTGCTGAATGCTGGAAGTCCTGGTCTACAGAAACACGTAGTTAAACCACAGCATCTCAGCGGCCTGGAGAGTCGATATGAAGAAATATTAGTTGAACTGGGTGAAGCTATAAAGGAGGAGAAAGCCCAGAACAGATTCTGAAAGGAAGGTGACCAGGATTTGACCcagctgaataaatatttgtctGTTCCTTTGTATCTGTCTAAACTTTAATACATCTTTTCCTCCACAAAAGACTTTGTATTTTGaataaatctttttacattaaga

Function

NR:

description
ATP-dependent RNA helicase DDX51

GO:

id name namespace
GO:0006364 rRNA processing biological_process
GO:0005730 nucleolus cellular_component
GO:0005524 ATP binding molecular_function
GO:0003723 RNA binding molecular_function

KEGG:

id description
K14807 DDX51, DBP6; ATP-dependent RNA helicase DDX51/DBP6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007260160.3 True 2380 mRNA 0.48 16 590353 605255

Neighbor

gene id symbol gene type direction distance location
adamts13 adamts13 coding upstream 20858 521279 ~ 569495 (+)
LOC103029345 NA coding upstream 339743 249084 ~ 250610 (+)
nkx6-3 nkx6-3,nkx6.3,LOC107726306,LOC107548267,LOC107683904,LOC107702846 coding upstream 473692 111254 ~ 116661 (+)
golm1 NA coding downstream 10935 616190 ~ 635257 (+)
G274953 LOC108426724,LOC108265340,LOC107691576,LOC107565112,LOC106580079 non-coding upstream 71027 480129 ~ 519326 (+)
G274963 NA non-coding upstream 157159 432843 ~ 433194 (+)
G274956 NA non-coding upstream 171010 417811 ~ 419343 (+)
G274955 NA non-coding upstream 172696 416484 ~ 417657 (+)
G274954 NA non-coding upstream 174212 415832 ~ 416141 (+)
rfk rfk,LOC107723557 other upstream 196164 384455 ~ 394189 (+)
G274945 NA other upstream 211179 378794 ~ 379174 (+)
LOC111189882 NA other upstream 481984 104420 ~ 108369 (+)

Expression


Co-expression Network