G77562


Basic Information

Item Value
gene id G77562
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 161583 ~ 161803 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU88441
TGGCAATGTCTTTATTATTTTAAACAATGTTTCTTAAAATTATTTTTACTTATTTTCCCTCCTTAATTCAAGGATGCCTATTGATGACCAGCAGAAGGAGCCAGTGTTGCATTCAAACCGCAAATCTTTTGTTCCATACTTCTTGTTTTCTTCTTCTGGTTTTTAGGAATAATAGCATCTGTCCCACTTCCTCCATATTACTAACTAGTAATGGTTAGGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88441 True 221 lncRNA 0.34 1 161583 161803

Neighbor

gene id symbol gene type direction distance location
CI01000013_00151644_00152374 SIX9 coding upstream 8487 151135 ~ 153096 (+)
CI01000013_00142867_00148461 SIX5 coding upstream 12575 142867 ~ 149008 (+)
CI01000013_00082083_00124049 YAP1 coding upstream 37534 82083 ~ 124049 (+)
CI01000013_00055395_00073103 NA coding upstream 88151 54114 ~ 73432 (+)
CI01000013_00259782_00293697 MAP3K10 coding downstream 97979 259782 ~ 293697 (+)
CI01000013_00432775_00439564 RCN2 coding downstream 270972 432775 ~ 439579 (+)
CI01000013_00441663_00456168 PSTPIP1A coding downstream 279860 441663 ~ 456456 (+)
CI01000013_00473761_00488628 NA coding downstream 311335 473138 ~ 488832 (+)
CI01000013_00490680_00491519 CH25HL1.1 coding downstream 328813 490616 ~ 491630 (+)
G77505 NA non-coding upstream 25930 134702 ~ 135653 (+)
G77541 NA non-coding upstream 47146 89806 ~ 114437 (+)
G77555 NA non-coding upstream 103165 58062 ~ 58418 (+)
G77507 NA non-coding downstream 492 162295 ~ 165109 (+)
G77534 NA non-coding downstream 131355 293158 ~ 300396 (+)
G77538 NA non-coding downstream 196698 358501 ~ 359239 (+)
G77635 NA non-coding downstream 209768 371571 ~ 371944 (+)
G77636 NA non-coding downstream 210250 372053 ~ 372408 (+)
G77533 NA other downstream 547030 708833 ~ 709549 (+)
G77695 NA other downstream 784718 946521 ~ 952969 (+)
G79309 NA other downstream 2304962 2466765 ~ 2467171 (+)
G80062 NA other downstream 3422205 3584008 ~ 3584784 (+)
CI01000013_04051081_04064651 NA other downstream 3903130 4050837 ~ 4065829 (+)

Expression


Co-expression Network