G77636


Basic Information

Item Value
gene id G77636
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 372053 ~ 372408 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU88515
TTCCACAGAAGAATGAGAGTCATGTGGGTTTGGAATGACATGAGGGTGAGTAAATGATGACAAAATGTTAATTTACAAGTAAAATATCTCTTTAAAATATCTAAGGGGGATGAAATGTTTTGTATCCAGGCAGTAATAACCTACATGGTCATAGACCCCAACTGATGGAGCAGTGAGTGGGTGGATGCAACTGCAGGGCAAAGGTCCGCAGATCACAAATGAGATAGAAGGGGGTGATGTAGGAGACGTAGGCCCAGATGGATGACGTCAGAGTAGTCTTGGCCTAGCAGGTCTGTCCCGCTGAGGTGTCGGGTCTGGACAGGCTCACACAGCCAACAGCCTGAGCAGCCACTGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88515 True 356 lncRNA 0.47 1 372053 372408

Neighbor

gene id symbol gene type direction distance location
CI01000013_00259782_00293697 MAP3K10 coding upstream 78356 259782 ~ 293697 (+)
CI01000013_00151644_00152374 SIX9 coding upstream 218957 151135 ~ 153096 (+)
CI01000013_00142867_00148461 SIX5 coding upstream 223045 142867 ~ 149008 (+)
CI01000013_00082083_00124049 YAP1 coding upstream 248004 82083 ~ 124049 (+)
CI01000013_00055395_00073103 NA coding upstream 298621 54114 ~ 73432 (+)
CI01000013_00432775_00439564 RCN2 coding downstream 60367 432775 ~ 439579 (+)
CI01000013_00441663_00456168 PSTPIP1A coding downstream 69255 441663 ~ 456456 (+)
CI01000013_00473761_00488628 NA coding downstream 100730 473138 ~ 488832 (+)
CI01000013_00490680_00491519 CH25HL1.1 coding downstream 118208 490616 ~ 491630 (+)
CI01000013_00526975_00537006 SLC28A1 coding downstream 154567 526975 ~ 537074 (+)
G77635 NA non-coding upstream 109 371571 ~ 371944 (+)
G77538 NA non-coding upstream 12814 358501 ~ 359239 (+)
G77534 NA non-coding upstream 71657 293158 ~ 300396 (+)
G77507 NA non-coding upstream 206944 162295 ~ 165109 (+)
G77562 NA non-coding upstream 210250 161583 ~ 161803 (+)
G77510 NA non-coding downstream 28209 400617 ~ 401655 (+)
G77519 NA non-coding downstream 84473 456881 ~ 457113 (+)
G77502 NA non-coding downstream 84917 457325 ~ 457873 (+)
G77540 NA non-coding downstream 136144 508552 ~ 511252 (+)
G77518 NA non-coding downstream 139743 512151 ~ 512902 (+)
G77533 NA other downstream 336425 708833 ~ 709549 (+)
G77695 NA other downstream 574113 946521 ~ 952969 (+)
G79309 NA other downstream 2094357 2466765 ~ 2467171 (+)
G80062 NA other downstream 3211600 3584008 ~ 3584784 (+)
CI01000013_04051081_04064651 NA other downstream 3692525 4050837 ~ 4065829 (+)

Expression


Co-expression Network