G77509


Basic Information

Item Value
gene id G77509
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 698039 ~ 702077 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU88387
CCACAAAACAATATATTTATTAAAAAAATCTGTGTATAAAATGTATACAACTTACAAATATTAACAAAGTCAATTTACTTGATATTCCCAGTGGAAATATTCTGTTTCTAGAGGTGAGAGAATGTTGGTTTGAGGAATGGACGAGCAGCGGTGTGTGGGGTGGGCAAAGCCATGAAGCCGGGCCTCTTCGCTGCTGGGACTGATGGAGCGGGCCTGGAACCCCTGCCTGCACTCCGACTCCCACCCCTGTATCCTCCTCCTCCTCTTGATGAAGACCAGTTATTGCTGTATCCACTGCAATAAGAATGGGGAGAGGTAGTTAATTTGATTATTTAGCCGATATGAAAGTCTGCACAATCCAACAATGCTGCTGTGACAAACATACTGACCCTTTAGAGGAGTTCTGGCCGCTGGAACCTTTCCTTCTTTTGGGTTTCCTGGAGTAAGACCCTTGCTTTCTCTTCGCTCCTCGTCCAGAGGTGTTTCTGAAATAGGTTGATGTGATGTCACCTTCATCATAATCGTCATCTTCATTTTGATGGCCTCTTGTCGTGTCAATCCATCCTGAACTCTCGGCCTGTGCCTCAGCTGCAGAGGAAGTGTGAGAACATCATGTCTCTTCAGCTGCTTTTTAAGTTGCTGTTTGGAGCTAGCTGATATATGATGTTTCACAAAGCAAGTTTTATAGGCAGAGCCATCCAAGCTGTATTATTATATTAAGTAATTTGTACTCATCTTGTACTAAGGAAAATTACATCATGGAGAAATATAAATATGTAGGAGGCTAATAATATCGGATAGTAAAATCAGAGGACCTCTTTTATGTTAACCTTTAATACCCCCTTAAAGGTTTAGTTCACCCAAAAATTAAAATCGTCATCATATTTTGTTCCAAACCTGTAAGACTTTTCATCTTCAAAGCACAAATAAATATATTTTAATGAAATCTGAGAGATTTCAGTTTCTCCGTTGACAGCTACGTAACTACCACTTTGATGCATCAAAAAGTTCATAAAGAGATCGTAAAACTAATCCATATGAATTAAACGGTTTAGTCCAAAGAGACTTTATCGCTTTATATGATGGACACGGACAGATTTAATTTAGGCTTTTATTCACATATAAACATTCATCAACGCACACATCAGATATGGTTTGTTCTAGATTGTTCTAGTCGACTAGTCACTCATTTAAGTCATTAGTCGGACATTTATGATAGTAATAATTACTTTAATATTACTTGGGGTTGAATATTATATGTAACATTGTTCTGCATTACAGAGAAAAGCTAAACCATAATAATGAGCAATTAAACATGAATTAAACGTGCATGCATAAATCTTGCCACACTGCCAGCTAAAGTAATGATTATGAATGTGTCAAAAAAACAGCTAGGAGACTGATCATTCTAACAATTTATTAATAAACTAGTGATTTCTGAGTCAGTGTCGGCTGCAAAGATGAAGTTGGCGACGCTGACTAGTCACCTCTACAGTATAGTGGATGCACCTAAGCATGCAGTAAGCGCAGTACTAATTTAGCTTCCACATTCACTAACACTTGGATATTCACCTAATAATAGCACACATTTATTTAGGTTAACGTTAGATCGGGCGGCCATGTTAAGTTGCTACTACTTACATGTTTCAAATGATAAGATAAGTCTGAGGTTAATGAATGTTAGGCGAATTTCTTGATATGCCATACATGGTAAGGTTTGATTCATAAGTCGTATGATTGGATGCTCAAGCCATCCTGGAGATTGTTGTTTGACCTATGTCTATAAATATGACCCTTCTTCCTGAATAAATCTGAGAATGCTTTGCACCACACTTGCTCTGTGTCTGCTTGGTCATTATCCCGAGATCTTGTGCTGTTGCTGCCACACATCACAGGGGTTGAGGCGCCTGTTTCTAAACTGATGACTGAGAGTACAAATATTCTACCTAAGATTGAGATTTTAATCTAACAGGTGAGTAATTGATGACAATTTTTTTCATTTTTGGGTGAACTATCCCTTTAAGTTGCGGCCACATTAGCAAAATTTTGAAGGCAAAAAGTCCATTGTCAATGAAGCAGAGCTCACAAAGAAGTTACTTTCAAACCAAGCAGCTTTCTGTTGAATTCAGGTGACCAACAAATTCTTGATCGCGTGGCTTCCAGTTGAAATGACTGGATTTATACCGTTTGGTGAATTTTCACAGGCAATGTGACCGCAACTTAAGAAAGATGCATATTTGCATTTCTACATTTGCCTCAGTTTTTGCCTGTGATCATCCATTTAGGTTACTAGTCTCTAGAACAAGGTTCAGGCTAGAAAGGATTACTGTAAAGTAGTGTGTCAGGGAAAGCGTTCATCTAGAGTATATAATCCATATGTAGATGAGAGTGTGTGCTGTCAAACCCTCACCAGGCAGCTGCCACTCCGAGTACTTCTGCAGCAGTTCAATAAACTCAGCTCCATACTTCTCCAGTTTGTCTTCGGTCACACCGTCAATCTGCAACAGCACATCCGGATCAGGCGAGAGGGTCTCTGCACAGAAACACATAACAATCCATTTAACACAGAGCACATGGGGCTGTGAAAAAGGAAGGGGATTAATTGCTTTAGCTTAACAAGGTGTTTCATCCCAGTAACACTTTGTGTAAATCTGCTTGTAAATAAAAAAAGACAGTTGTAAATGAGCTATGTGTTTATATTTTTTATTTATATATTACGAAAATTGGCTAACCAGCAATCTTTTTGAGTGTGGCTGTGGAGAAAATGTTGTAGTAATGAATGCCGAAAACTTTGCCCAACTTCTTGCACAGATCATTGAGCTCCTGCAGACACTTTTTAACCATCTCCTCTCTCTTAGAGACGTTCTCAGTCACAGATGCTTTGTGCTTTCTGATGCTGGATGCACTCTCAGTCTCAATAAATTCAACCTGCAATGGGGTATCATCATTATTACAGATTTTGCATAGAGCATACAACATTAATATTGAGCATAAAAAGCAGTGTCAGAGGACAGAACAATATATTAATAGTCCCACCTGCATGCAGCCATTCAGTACACTCATAGCTTTAGGCCCTGCAGAGATATAGGCCACTGCCTGCCCGTTATTAGTGATGTACAGGTCCTCCACCAGAACACTATCCAACACCAGTTTCTTAAAGAGCCTCTCAGCATTGTGTTTGGAATATGCTGCTCCAACCCCGAACATTCCGGACTGGATCCGAGCACTTTTGGAGCCTGTCGCACAGAGATATTCTTATTGAGACTGTCCTGACAGGCATTAAATCTCAAGCACTGTATGAGGCAAAAGATATTCATAGTAATATTCACACTATCATTTATGACTTCTTACCCAGAAATATGTCAACCAGCATGTTGAGGGTAAGCCGGTTCAGCTGGGCGGATTTGCCATATCTGCTTCCAACCTTCTCACAGTTCTCCTGCACAAACCTCGCAATCTTCTTCACATCATCGGTGACATTTCTTGATTTATATTTCTGAAGGTAAGTATTAAGATGTGTGAATTTATATTGGCAATTAATACATAATGGCACTATTCGAAATGTTCAAGTTTCTAAAGTAAATAATTAGTCAATTAACTTGTTTGGTAAGCAAACGAAATTCAATTTCAAGCAATGAGTGCATACAATTATACAGTTTGTTATTAAGAATTACATTTGCATAATGCATGCTGTGTAAAGAATGAACTGATTTGATGATGGTCTTACGTGTGGTCTGGCACAATTGTCACAGATGACCTCAGGATGCTCTTTACAGAAGCTTGTATTAAACGTGTGCTCGCCAAAGTAAGCCAGCAACTGGATTCTCCTGCACTCGGCCAAATTCTCACAGAAATGCACCATGCTGTGCAGGTTGTTGATGTGGGTGGCTTTGGATTGCTGGTTGCCATCTTTATCCACTGCAATTATATTAACTGTTATGTAGGCCACGCTCACACAGACAGGTTAACTATGACTATATAATAGCGTCTGGATTTTAATATTCAACATCCATGTTTTAAACATCTTTATGTGAAGGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88387 True 4039 lncRNA 0.39 1 698039 702077

Neighbor

gene id symbol gene type direction distance location
CI01000013_00657437_00692874 FRMD5 coding upstream 5165 657437 ~ 692874 (+)
CI01000013_00561825_00581324 NA coding upstream 116463 560823 ~ 581576 (+)
CI01000013_00526975_00537006 SLC28A1 coding upstream 160965 526975 ~ 537074 (+)
CI01000013_00490680_00491519 CH25HL1.1 coding upstream 206409 490616 ~ 491630 (+)
CI01000013_00473761_00488628 NA coding upstream 209207 473138 ~ 488832 (+)
CI01000013_00849127_00850710 ANKRD34C coding downstream 146513 848590 ~ 850969 (+)
CI01000013_00862608_00869073 IDH2, IDHP, IDH2.S coding downstream 160341 862418 ~ 869073 (+)
CI01000013_00870861_00871425 IDH2 coding downstream 168784 870861 ~ 871522 (+)
CI01000013_01007844_01029438 SEMA4B, SEMA4BA coding downstream 305767 1007844 ~ 1029459 (+)
CI01000013_01036536_01049545 NA coding downstream 334459 1036536 ~ 1049882 (+)
G77530 NA non-coding upstream 63200 616917 ~ 634839 (+)
G77518 NA non-coding upstream 185137 512151 ~ 512902 (+)
G77540 NA non-coding upstream 186787 508552 ~ 511252 (+)
G77502 NA non-coding upstream 240166 457325 ~ 457873 (+)
G77528 NA non-coding downstream 4466 706543 ~ 707255 (+)
G77536 NA non-coding downstream 8039 710116 ~ 710507 (+)
G77712 NA non-coding downstream 81704 783781 ~ 784456 (+)
G77724 NA non-coding downstream 135252 837329 ~ 837561 (+)
G77725 NA non-coding downstream 135620 837697 ~ 838044 (+)
G77533 NA other downstream 6756 708833 ~ 709549 (+)
G77695 NA other downstream 244444 946521 ~ 952969 (+)
G79309 NA other downstream 1764688 2466765 ~ 2467171 (+)
G80062 NA other downstream 2881931 3584008 ~ 3584784 (+)
CI01000013_04051081_04064651 NA other downstream 3362856 4050837 ~ 4065829 (+)

Expression


Co-expression Network