G77536


Basic Information

Item Value
gene id G77536
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 710116 ~ 710507 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU88414
GTTTGAGCAGTGACAGCTTGTTCTGTGCAGCATTATTGTGTCGGTCCAGTTGCTCCTTTAGGTTGTTTTGAGGAAGACTCGGCATTGTGTGTATATTTATATGAAATTATACTCCTCAGTATATGGCATTTAATCAACTCCACAAACAAACACACGTAAATAAACACAGGAATGCTCCGTTAGAATTAATGCGACATTACAACCCTCGATTGTTTAGCACAAAAACACTCACAGCGCGACGTTTTGCTCTATTTCCGCCATCGTAAGGACTTCAAAATCACAAAACTCCTTTACAATTACCGCCACCGAAAATGAACGTTTGATATTCTGGTACAAACAAAACAATATATGCACAACACACAACGTCACCATAACACACCGCTGAAAGCTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88414 True 392 lncRNA 0.40 1 710116 710507

Neighbor

gene id symbol gene type direction distance location
CI01000013_00657437_00692874 FRMD5 coding upstream 17242 657437 ~ 692874 (+)
CI01000013_00561825_00581324 NA coding upstream 128540 560823 ~ 581576 (+)
CI01000013_00526975_00537006 SLC28A1 coding upstream 173042 526975 ~ 537074 (+)
CI01000013_00490680_00491519 CH25HL1.1 coding upstream 218486 490616 ~ 491630 (+)
CI01000013_00473761_00488628 NA coding upstream 221284 473138 ~ 488832 (+)
CI01000013_00849127_00850710 ANKRD34C coding downstream 138083 848590 ~ 850969 (+)
CI01000013_00862608_00869073 IDH2, IDHP, IDH2.S coding downstream 151911 862418 ~ 869073 (+)
CI01000013_00870861_00871425 IDH2 coding downstream 160354 870861 ~ 871522 (+)
CI01000013_01007844_01029438 SEMA4B, SEMA4BA coding downstream 297337 1007844 ~ 1029459 (+)
CI01000013_01036536_01049545 NA coding downstream 326029 1036536 ~ 1049882 (+)
G77528 NA non-coding upstream 2861 706543 ~ 707255 (+)
G77509 NA non-coding upstream 8039 698039 ~ 702077 (+)
G77530 NA non-coding upstream 75277 616917 ~ 634839 (+)
G77518 NA non-coding upstream 197214 512151 ~ 512902 (+)
G77712 NA non-coding downstream 73274 783781 ~ 784456 (+)
G77724 NA non-coding downstream 126822 837329 ~ 837561 (+)
G77725 NA non-coding downstream 127190 837697 ~ 838044 (+)
G77729 NA non-coding downstream 140923 851430 ~ 853530 (+)
G77736 NA non-coding downstream 182157 892664 ~ 892941 (+)
G77533 NA other upstream 567 708833 ~ 709549 (+)
G77695 NA other downstream 236014 946521 ~ 952969 (+)
G79309 NA other downstream 1756258 2466765 ~ 2467171 (+)
G80062 NA other downstream 2873501 3584008 ~ 3584784 (+)
CI01000013_04051081_04064651 NA other downstream 3354426 4050837 ~ 4065829 (+)
G80845 NA other downstream 4124571 4835078 ~ 4836232 (+)

Expression


Co-expression Network