G77736


Basic Information

Item Value
gene id G77736
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 892664 ~ 892941 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU88623
ATTGCTGCACTGACGAGAATGTCTCCCAAGCGTTTTAGGTGTTCTGTAGCTGGATGGATTAATCCACATAGCTCTCTCCATTTACTCCCTAAATCTGAGCCGCTGAAGACGAGGTGGATTAATTTTGTTTTCGAAGAAAATGCTCCCTCAACTCTACCGAAATTCGTTTATGTCTGCGCGAATCATTTCACAATACAAAGGGACAATACAAAACAGAGGTTGTGCTAAAAATTTGTTACTCAAGGATAGATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88623 True 252 lncRNA 0.41 2 892664 892941

Neighbor

gene id symbol gene type direction distance location
CI01000013_00870861_00871425 IDH2 coding upstream 21142 870861 ~ 871522 (+)
CI01000013_00862608_00869073 IDH2, IDHP, IDH2.S coding upstream 23591 862418 ~ 869073 (+)
CI01000013_00849127_00850710 ANKRD34C coding upstream 41695 848590 ~ 850969 (+)
CI01000013_00657437_00692874 FRMD5 coding upstream 199790 657437 ~ 692874 (+)
CI01000013_00561825_00581324 NA coding upstream 311088 560823 ~ 581576 (+)
CI01000013_01007844_01029438 SEMA4B, SEMA4BA coding downstream 114903 1007844 ~ 1029459 (+)
CI01000013_01036536_01049545 NA coding downstream 143595 1036536 ~ 1049882 (+)
CI01000013_01115756_01164524 NA coding downstream 222815 1115756 ~ 1166617 (+)
CI01000013_01220794_01229752 GNRHR4 coding downstream 327853 1220794 ~ 1230958 (+)
CI01000013_01275415_01295230 PLIN1 coding downstream 382181 1275122 ~ 1295324 (+)
G77729 NA non-coding upstream 39134 851430 ~ 853530 (+)
G77725 NA non-coding upstream 54620 837697 ~ 838044 (+)
G77724 NA non-coding upstream 55103 837329 ~ 837561 (+)
G77712 NA non-coding upstream 108208 783781 ~ 784456 (+)
G77536 NA non-coding upstream 182157 710116 ~ 710507 (+)
G77739 NA non-coding downstream 4809 897750 ~ 897950 (+)
G77747 NA non-coding downstream 15656 908597 ~ 908910 (+)
G77765 NA non-coding downstream 44308 937249 ~ 937457 (+)
G77800 NA non-coding downstream 180561 1073502 ~ 1073829 (+)
G77533 NA other upstream 183115 708833 ~ 709549 (+)
G77695 NA other downstream 53580 946521 ~ 952969 (+)
G79309 NA other downstream 1573824 2466765 ~ 2467171 (+)
G80062 NA other downstream 2691067 3584008 ~ 3584784 (+)
CI01000013_04051081_04064651 NA other downstream 3171992 4050837 ~ 4065829 (+)
G80845 NA other downstream 3942137 4835078 ~ 4836232 (+)

Expression


Co-expression Network