G77747


Basic Information

Item Value
gene id G77747
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 908597 ~ 908910 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU88634
AGCAGGAGCACGGCGTGTTTTTGCTCACACCCAAATAGGGGCAAATTTGACAAGCTATAGTAAATGATCTGTGGGATATTTTGAGCTGAAACTTCACAGACACATTCTGGGGACACCAGAGACTTATATTACATCTTATAAAAGGGACATTATAGGTCCCCTTTAAATCATTTCTTTAATTCCTTTAAATAAAAATGTCCATTTCAAGGGTCCCCCAAATGTTCAAGACACCTTGGTTTAAATAAGGCAGTGCAGGCTTTTTAGTGCAATTTTAGCTGATTTTGATGTAGTGTTTTGAGCTGTTCAATGTCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88634 True 314 lncRNA 0.38 1 908597 908910

Neighbor

gene id symbol gene type direction distance location
CI01000013_00870861_00871425 IDH2 coding upstream 37075 870861 ~ 871522 (+)
CI01000013_00862608_00869073 IDH2, IDHP, IDH2.S coding upstream 39524 862418 ~ 869073 (+)
CI01000013_00849127_00850710 ANKRD34C coding upstream 57628 848590 ~ 850969 (+)
CI01000013_00657437_00692874 FRMD5 coding upstream 215723 657437 ~ 692874 (+)
CI01000013_00561825_00581324 NA coding upstream 327021 560823 ~ 581576 (+)
CI01000013_01007844_01029438 SEMA4B, SEMA4BA coding downstream 98934 1007844 ~ 1029459 (+)
CI01000013_01036536_01049545 NA coding downstream 127626 1036536 ~ 1049882 (+)
CI01000013_01115756_01164524 NA coding downstream 206846 1115756 ~ 1166617 (+)
CI01000013_01220794_01229752 GNRHR4 coding downstream 311884 1220794 ~ 1230958 (+)
CI01000013_01275415_01295230 PLIN1 coding downstream 366212 1275122 ~ 1295324 (+)
G77739 NA non-coding upstream 10647 897750 ~ 897950 (+)
G77736 NA non-coding upstream 15656 892664 ~ 892941 (+)
G77729 NA non-coding upstream 55067 851430 ~ 853530 (+)
G77725 NA non-coding upstream 70553 837697 ~ 838044 (+)
G77724 NA non-coding upstream 71036 837329 ~ 837561 (+)
G77765 NA non-coding downstream 28339 937249 ~ 937457 (+)
G77800 NA non-coding downstream 164592 1073502 ~ 1073829 (+)
G77826 NA non-coding downstream 272292 1181202 ~ 1181428 (+)
G77829 NA non-coding downstream 277999 1186909 ~ 1187191 (+)
G77533 NA other upstream 199048 708833 ~ 709549 (+)
G77695 NA other downstream 37611 946521 ~ 952969 (+)
G79309 NA other downstream 1557855 2466765 ~ 2467171 (+)
G80062 NA other downstream 2675098 3584008 ~ 3584784 (+)
CI01000013_04051081_04064651 NA other downstream 3156023 4050837 ~ 4065829 (+)
G80845 NA other downstream 3926168 4835078 ~ 4836232 (+)

Expression


Co-expression Network