G77894


Basic Information

Item Value
gene id G77894
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 1317251 ~ 1317663 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU88799
CTTATTTTGTTCATTAGATCGAAAGATCTGAAAAACCCCATACATTTACCCACCTATAGACCCTCCCCTCAAAGAAATCAGGACAGAAGTGGTTGAAAGTGGACAAAAGAGATGGATTAATATACCAGGTGTAAATGGGTATGTGTCTCCCTCGTCTACTTGTGATCCAATCGACCAAAACACATCTTAATACCAGGTGTAAACAGGGCCTCAGAGCAAGGTCTTCACATAAAGCAAATTGCACCATTCGCAAAACCAGTTAAAACACAGTAAACAAGTATTGTTTCAAGGCCACCACTAGCTTGCAATCTTTTACACACGTTTTCATTTAGGTCTAAATTTTAGGGCAAACTACATTTCACTTTGAACTACATGAAAATGTACTTAGATTTTGGCTTCCATTCATGGTCAAT

Function

NR:

description
PREDICTED: cathepsin S-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88799 True 413 lncRNA 0.38 1 1317251 1317663

Neighbor

gene id symbol gene type direction distance location
CI01000013_01275415_01295230 PLIN1 coding upstream 21927 1275122 ~ 1295324 (+)
CI01000013_01220794_01229752 GNRHR4 coding upstream 86293 1220794 ~ 1230958 (+)
CI01000013_01115756_01164524 NA coding upstream 152727 1115756 ~ 1166617 (+)
CI01000013_01036536_01049545 NA coding upstream 267369 1036536 ~ 1049882 (+)
CI01000013_01007844_01029438 SEMA4B, SEMA4BA coding upstream 287792 1007844 ~ 1029459 (+)
CI01000013_01335438_01381270 SLCO3A1 coding downstream 17775 1335438 ~ 1381270 (+)
CI01000013_01405290_01429838 NA coding downstream 87627 1405290 ~ 1430313 (+)
CI01000013_01443540_01469011 CHD2 coding downstream 125877 1443540 ~ 1469076 (+)
CI01000013_01629280_01635701 NA coding downstream 311565 1629228 ~ 1635772 (+)
CI01000013_01762491_01764612 NA coding downstream 444095 1761758 ~ 1764805 (+)
G77829 NA non-coding upstream 130060 1186909 ~ 1187191 (+)
G77826 NA non-coding upstream 135823 1181202 ~ 1181428 (+)
G77800 NA non-coding upstream 243422 1073502 ~ 1073829 (+)
G77765 NA non-coding upstream 379794 937249 ~ 937457 (+)
G77895 NA non-coding downstream 58 1317721 ~ 1317963 (+)
G77875 NA non-coding downstream 153157 1470820 ~ 1471360 (+)
G77918 NA non-coding downstream 166811 1484474 ~ 1484721 (+)
G77929 NA non-coding downstream 188220 1505883 ~ 1506110 (+)
G77695 NA other upstream 364282 946521 ~ 952969 (+)
G77533 NA other upstream 607702 708833 ~ 709549 (+)
G79309 NA other downstream 1149102 2466765 ~ 2467171 (+)
G80062 NA other downstream 2266345 3584008 ~ 3584784 (+)
CI01000013_04051081_04064651 NA other downstream 2747270 4050837 ~ 4065829 (+)
G80845 NA other downstream 3517415 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 4738635 6049864 ~ 6060269 (+)

Expression


Co-expression Network