G77875


Basic Information

Item Value
gene id G77875
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 1470820 ~ 1471360 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU88780
AGTTTTCATAACTAGTTTTATGGAACCTACATTTTTATTTATATTTTATTTAATGTGATTTAGGATAATCCTCTAAATAAAGAAAAGTTAAAGAAAAAAAGACGTTTGAGCTTAATTGTCTCAGCCGTTCGCTTCGCGCGCTTTACGTGCATGAATACTCTGAGAGGAATGACAGGGATTGCTGAGGTAAGAGACTTCACTACATAATACACGACACACATTCAATATTTTGTAGTTTTTCAGCACGTTTTAACATCAACAAAGTACATTTCGCCTACAGTTAAATCAAAAAAGGAATAAATATAAAGTTAGAGCGCTGGTAACGTCCCTCATATCGACACCAATCACGTGTTTTGTTGTAATGTCGAATTAGTTACGAAACTTGTTAAAATCTTTATTAAATCTTTCTGCTTAGCATTTGTGTAAGCTTATTCTGCAGTTTTATAGACCACAAACACGGTAACATTCATTAATTCTACTCTTGACAATCATAGTTGTAGTCTAACATGGTTTAGCAATTTGAGTTTACCTATTATACCAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88780 True 541 lncRNA 0.33 1 1470820 1471360

Neighbor

gene id symbol gene type direction distance location
CI01000013_01443540_01469011 CHD2 coding upstream 1744 1443540 ~ 1469076 (+)
CI01000013_01405290_01429838 NA coding upstream 40507 1405290 ~ 1430313 (+)
CI01000013_01335438_01381270 SLCO3A1 coding upstream 89550 1335438 ~ 1381270 (+)
CI01000013_01275415_01295230 PLIN1 coding upstream 175496 1275122 ~ 1295324 (+)
CI01000013_01220794_01229752 GNRHR4 coding upstream 239862 1220794 ~ 1230958 (+)
CI01000013_01629280_01635701 NA coding downstream 157868 1629228 ~ 1635772 (+)
CI01000013_01762491_01764612 NA coding downstream 290398 1761758 ~ 1764805 (+)
CI01000013_01950237_01964249 NA coding downstream 478655 1950015 ~ 1964290 (+)
CI01000013_01989323_01993472 NR2F2.L, NR2F2 coding downstream 517171 1988531 ~ 1994075 (+)
CI01000013_02033469_02034368 NA coding downstream 561755 2033115 ~ 2034738 (+)
G77895 NA non-coding upstream 152857 1317721 ~ 1317963 (+)
G77894 NA non-coding upstream 153157 1317251 ~ 1317663 (+)
G77829 NA non-coding upstream 283629 1186909 ~ 1187191 (+)
G77826 NA non-coding upstream 289392 1181202 ~ 1181428 (+)
G77918 NA non-coding downstream 13114 1484474 ~ 1484721 (+)
G77929 NA non-coding downstream 34523 1505883 ~ 1506110 (+)
G77946 NA non-coding downstream 58960 1530320 ~ 1530575 (+)
G78008 NA non-coding downstream 142149 1613509 ~ 1613776 (+)
G77981 NA non-coding downstream 145344 1616704 ~ 1617004 (+)
G77695 NA other upstream 517851 946521 ~ 952969 (+)
G77533 NA other upstream 761271 708833 ~ 709549 (+)
G79309 NA other downstream 995405 2466765 ~ 2467171 (+)
G80062 NA other downstream 2112648 3584008 ~ 3584784 (+)
CI01000013_04051081_04064651 NA other downstream 2593573 4050837 ~ 4065829 (+)
G80845 NA other downstream 3363718 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 4584938 6049864 ~ 6060269 (+)

Expression


Co-expression Network