G77929


Basic Information

Item Value
gene id G77929
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 1505883 ~ 1506110 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU88835
TTCACATTTCCGGGTTCCTCAGAAGCGGAAGTCGTCATAGTTGGGTAAAACTCTACGGCGGTGAATGAGAGAATACATTAAATATATTTTTTTGTGTTTCCATTTGCTCAAATAGCAAAAGAAAAACTCCACAATAGTGTTTTCACAACATTCAAAAAGAGGAAAAAAATAAAAAAAACGATTGATAACGGCAGTCAGAAGAGAGAAAGATGGCATTTTTACCGTCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88835 True 228 lncRNA 0.36 1 1505883 1506110

Neighbor

gene id symbol gene type direction distance location
CI01000013_01443540_01469011 CHD2 coding upstream 36807 1443540 ~ 1469076 (+)
CI01000013_01405290_01429838 NA coding upstream 75570 1405290 ~ 1430313 (+)
CI01000013_01335438_01381270 SLCO3A1 coding upstream 124613 1335438 ~ 1381270 (+)
CI01000013_01275415_01295230 PLIN1 coding upstream 210559 1275122 ~ 1295324 (+)
CI01000013_01220794_01229752 GNRHR4 coding upstream 274925 1220794 ~ 1230958 (+)
CI01000013_01629280_01635701 NA coding downstream 123118 1629228 ~ 1635772 (+)
CI01000013_01762491_01764612 NA coding downstream 255648 1761758 ~ 1764805 (+)
CI01000013_01950237_01964249 NA coding downstream 443905 1950015 ~ 1964290 (+)
CI01000013_01989323_01993472 NR2F2.L, NR2F2 coding downstream 482421 1988531 ~ 1994075 (+)
CI01000013_02033469_02034368 NA coding downstream 527005 2033115 ~ 2034738 (+)
G77918 NA non-coding upstream 21162 1484474 ~ 1484721 (+)
G77875 NA non-coding upstream 34523 1470820 ~ 1471360 (+)
G77895 NA non-coding upstream 187920 1317721 ~ 1317963 (+)
G77894 NA non-coding upstream 188220 1317251 ~ 1317663 (+)
G77946 NA non-coding downstream 24210 1530320 ~ 1530575 (+)
G78008 NA non-coding downstream 107399 1613509 ~ 1613776 (+)
G77981 NA non-coding downstream 110594 1616704 ~ 1617004 (+)
G78010 NA non-coding downstream 113505 1619615 ~ 1619853 (+)
G78017 NA non-coding downstream 124699 1630809 ~ 1631072 (+)
G77695 NA other upstream 552914 946521 ~ 952969 (+)
G77533 NA other upstream 796334 708833 ~ 709549 (+)
G79309 NA other downstream 960655 2466765 ~ 2467171 (+)
G80062 NA other downstream 2077898 3584008 ~ 3584784 (+)
CI01000013_04051081_04064651 NA other downstream 2558823 4050837 ~ 4065829 (+)
G80845 NA other downstream 3328968 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 4550188 6049864 ~ 6060269 (+)

Expression


Co-expression Network