G78008


Basic Information

Item Value
gene id G78008
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 1613509 ~ 1613776 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU88914
GCTAATGAGTGTTTTGCTTCCAAAACACGCTGTAAGCGGTCAACCAAATGTACAGTCAATCCAAAATTTATTCAGACACCTTGAACATTTCATTCATTAATACAGTTTATTCACTATAGTTTAAAAAATGGTAATAAAATATGACAAGATCTCAGAGTTAAACTGTGTCAGAAAACATTAATCTTAATTATGTCAGATAACACTTGGTCAGGTCAAAGTGTCTGAATAATTTTTGCTTCCAAATTTTTATCAATTTTACTGGTAGTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88914 True 268 lncRNA 0.31 1 1613509 1613776

Neighbor

gene id symbol gene type direction distance location
CI01000013_01443540_01469011 CHD2 coding upstream 144433 1443540 ~ 1469076 (+)
CI01000013_01405290_01429838 NA coding upstream 183196 1405290 ~ 1430313 (+)
CI01000013_01335438_01381270 SLCO3A1 coding upstream 232239 1335438 ~ 1381270 (+)
CI01000013_01275415_01295230 PLIN1 coding upstream 318185 1275122 ~ 1295324 (+)
CI01000013_01220794_01229752 GNRHR4 coding upstream 382551 1220794 ~ 1230958 (+)
CI01000013_01629280_01635701 NA coding downstream 15452 1629228 ~ 1635772 (+)
CI01000013_01762491_01764612 NA coding downstream 147982 1761758 ~ 1764805 (+)
CI01000013_01950237_01964249 NA coding downstream 336239 1950015 ~ 1964290 (+)
CI01000013_01989323_01993472 NR2F2.L, NR2F2 coding downstream 374755 1988531 ~ 1994075 (+)
CI01000013_02033469_02034368 NA coding downstream 419339 2033115 ~ 2034738 (+)
G77946 NA non-coding upstream 82934 1530320 ~ 1530575 (+)
G77929 NA non-coding upstream 107399 1505883 ~ 1506110 (+)
G77918 NA non-coding upstream 128788 1484474 ~ 1484721 (+)
G77875 NA non-coding upstream 142149 1470820 ~ 1471360 (+)
G77981 NA non-coding downstream 2928 1616704 ~ 1617004 (+)
G78010 NA non-coding downstream 5839 1619615 ~ 1619853 (+)
G78017 NA non-coding downstream 17033 1630809 ~ 1631072 (+)
G78019 NA non-coding downstream 18027 1631803 ~ 1632003 (+)
G78020 NA non-coding downstream 18415 1632191 ~ 1632513 (+)
G77695 NA other upstream 660540 946521 ~ 952969 (+)
G77533 NA other upstream 903960 708833 ~ 709549 (+)
G79309 NA other downstream 852989 2466765 ~ 2467171 (+)
G80062 NA other downstream 1970232 3584008 ~ 3584784 (+)
CI01000013_04051081_04064651 NA other downstream 2451157 4050837 ~ 4065829 (+)
G80845 NA other downstream 3221302 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 4442522 6049864 ~ 6060269 (+)

Expression


Co-expression Network