G78010


Basic Information

Item Value
gene id G78010
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 1619615 ~ 1619853 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU88916
AGTGATTACATGAGACATGATACATTCCGGTAAGGTGTATCTTTCAACATACCTTTGATGTTCATGCATGTTTTTCGAGATATAACTTGTATTAAAATGAAAGAAAAGACTCGCGCTGCTGCTTGAAATGAGGCACTAGAGCGATCTGTCACGTCACATTTAAGAGCGTCAAAACGCCATTTATTGTTTCTAATCAGAAGTAACAAAGCAAAAAAATCTTTGTGATTATCGGATGGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88916 True 239 lncRNA 0.37 1 1619615 1619853

Neighbor

gene id symbol gene type direction distance location
CI01000013_01443540_01469011 CHD2 coding upstream 150539 1443540 ~ 1469076 (+)
CI01000013_01405290_01429838 NA coding upstream 189302 1405290 ~ 1430313 (+)
CI01000013_01335438_01381270 SLCO3A1 coding upstream 238345 1335438 ~ 1381270 (+)
CI01000013_01275415_01295230 PLIN1 coding upstream 324291 1275122 ~ 1295324 (+)
CI01000013_01220794_01229752 GNRHR4 coding upstream 388657 1220794 ~ 1230958 (+)
CI01000013_01629280_01635701 NA coding downstream 9375 1629228 ~ 1635772 (+)
CI01000013_01762491_01764612 NA coding downstream 141905 1761758 ~ 1764805 (+)
CI01000013_01950237_01964249 NA coding downstream 330162 1950015 ~ 1964290 (+)
CI01000013_01989323_01993472 NR2F2.L, NR2F2 coding downstream 368678 1988531 ~ 1994075 (+)
CI01000013_02033469_02034368 NA coding downstream 413262 2033115 ~ 2034738 (+)
G77981 NA non-coding upstream 2611 1616704 ~ 1617004 (+)
G78008 NA non-coding upstream 5839 1613509 ~ 1613776 (+)
G77946 NA non-coding upstream 89040 1530320 ~ 1530575 (+)
G77929 NA non-coding upstream 113505 1505883 ~ 1506110 (+)
G77918 NA non-coding upstream 134894 1484474 ~ 1484721 (+)
G78017 NA non-coding downstream 10956 1630809 ~ 1631072 (+)
G78019 NA non-coding downstream 11950 1631803 ~ 1632003 (+)
G78020 NA non-coding downstream 12338 1632191 ~ 1632513 (+)
G78028 NA non-coding downstream 22716 1642569 ~ 1643119 (+)
G77695 NA other upstream 666646 946521 ~ 952969 (+)
G77533 NA other upstream 910066 708833 ~ 709549 (+)
G79309 NA other downstream 846912 2466765 ~ 2467171 (+)
G80062 NA other downstream 1964155 3584008 ~ 3584784 (+)
CI01000013_04051081_04064651 NA other downstream 2445080 4050837 ~ 4065829 (+)
G80845 NA other downstream 3215225 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 4436445 6049864 ~ 6060269 (+)

Expression


Co-expression Network