G78028


Basic Information

Item Value
gene id G78028
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 1642569 ~ 1643119 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU88935
ATAAGACATCTTTGTTTCGAAATCAAAATCTGGTGTCAGGCGTTTAACATTTATAATGGTATGCTAAAGTGACATGGTAGATTACCTGGATTGACTAATGGTTTCTCATGACTACAAAGTTTCTCTCAATGTTAAGTGTGGTTGAGAACACGGAGTCTCTTACGTGTCACGACAGGATGTAGTAATTCTCAGAAGAACCCAAAAGAAGACATTTTGAAGAAAGAATCACTTTGGTTACCATTGACTTCCACTGTATGGAGATATATCTCAAAATATCTTTTATGTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88935 True 287 lncRNA 0.36 2 1642569 1643119

Neighbor

gene id symbol gene type direction distance location
CI01000013_01629280_01635701 NA coding upstream 6797 1629228 ~ 1635772 (+)
CI01000013_01443540_01469011 CHD2 coding upstream 173493 1443540 ~ 1469076 (+)
CI01000013_01405290_01429838 NA coding upstream 212256 1405290 ~ 1430313 (+)
CI01000013_01335438_01381270 SLCO3A1 coding upstream 261299 1335438 ~ 1381270 (+)
CI01000013_01275415_01295230 PLIN1 coding upstream 347245 1275122 ~ 1295324 (+)
CI01000013_01762491_01764612 NA coding downstream 118639 1761758 ~ 1764805 (+)
CI01000013_01950237_01964249 NA coding downstream 306896 1950015 ~ 1964290 (+)
CI01000013_01989323_01993472 NR2F2.L, NR2F2 coding downstream 345412 1988531 ~ 1994075 (+)
CI01000013_02033469_02034368 NA coding downstream 389996 2033115 ~ 2034738 (+)
CI01000013_02081079_02127936 NA coding downstream 437547 2080666 ~ 2128269 (+)
G78020 NA non-coding upstream 10056 1632191 ~ 1632513 (+)
G78019 NA non-coding upstream 10566 1631803 ~ 1632003 (+)
G78017 NA non-coding upstream 11497 1630809 ~ 1631072 (+)
G78010 NA non-coding upstream 22716 1619615 ~ 1619853 (+)
G78032 NA non-coding downstream 7449 1650568 ~ 1650776 (+)
G78073 NA non-coding downstream 62274 1705393 ~ 1705660 (+)
G78124 NA non-coding downstream 144424 1787543 ~ 1787793 (+)
G78231 NA non-coding downstream 286361 1929480 ~ 1929832 (+)
G78247 NA non-coding downstream 313594 1956713 ~ 1957220 (+)
G77695 NA other upstream 689600 946521 ~ 952969 (+)
G77533 NA other upstream 933020 708833 ~ 709549 (+)
G79309 NA other downstream 823646 2466765 ~ 2467171 (+)
G80062 NA other downstream 1940889 3584008 ~ 3584784 (+)
CI01000013_04051081_04064651 NA other downstream 2421814 4050837 ~ 4065829 (+)
G80845 NA other downstream 3191959 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 4413179 6049864 ~ 6060269 (+)

Expression


Co-expression Network