G78247


Basic Information

Item Value
gene id G78247
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 1956713 ~ 1957220 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU89157
AAAAAAAAAAAAAAAAGTAGTCTTGCTAGGTCAAGACCACAGCTGGGTCATGAAGTAAAAAAAAAAAAGAAAAAAGTAAGAAAGAAATCAGGCCTGTGTTGACATTCATGGGGCAAAGGGCCTGCGCACATTTGCAGAGGTCATCGGAAAGTAAACACCTATTAATGGTTACCTGCTTGACGAACAGATAAGCAGGTCAAGGTAATGATTAAGCCACAGCTTGCTGGGTTACAGGCCATGTGTGCACAAAAGCATGCTGGGCGAATGCAGGTCTGCGTTGGTGATAAAACACAAATATTAATCGTTATAGAACAACAGCCTTTGAGCTGAGATGTATCAGAGCATCGAGACACACACACACACACACACACACACACACACACACACACACACACACACACACCTGTGAGAGCAGTAAAAAACACACTTGTCAACAGCCATTAGCACATTCATGCAGGTACTGTACTGTGGGTGGCTTGTTGACTGTACAGCGCAGGTTAGAGNNNNN

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89157 True 508 lncRNA 0.43 1 1956713 1957220

Neighbor

gene id symbol gene type direction distance location
CI01000013_01762491_01764612 NA coding upstream 191908 1761758 ~ 1764805 (+)
CI01000013_01629280_01635701 NA coding upstream 320941 1629228 ~ 1635772 (+)
CI01000013_01443540_01469011 CHD2 coding upstream 487637 1443540 ~ 1469076 (+)
CI01000013_01405290_01429838 NA coding upstream 526400 1405290 ~ 1430313 (+)
CI01000013_01335438_01381270 SLCO3A1 coding upstream 575443 1335438 ~ 1381270 (+)
CI01000013_01989323_01993472 NR2F2.L, NR2F2 coding downstream 31311 1988531 ~ 1994075 (+)
CI01000013_02033469_02034368 NA coding downstream 75895 2033115 ~ 2034738 (+)
CI01000013_02081079_02127936 NA coding downstream 123446 2080666 ~ 2128269 (+)
CI01000013_02386700_02394730 NA coding downstream 429128 2386348 ~ 2395296 (+)
CI01000013_02409027_02409452 NA coding downstream 450086 2407306 ~ 2409607 (+)
G78231 NA non-coding upstream 26881 1929480 ~ 1929832 (+)
G78124 NA non-coding upstream 168920 1787543 ~ 1787793 (+)
G78073 NA non-coding upstream 251053 1705393 ~ 1705660 (+)
G78032 NA non-coding upstream 305937 1650568 ~ 1650776 (+)
G78028 NA non-coding upstream 313594 1642569 ~ 1643119 (+)
G78254 NA non-coding downstream 7943 1965163 ~ 1965423 (+)
G78260 NA non-coding downstream 17840 1975060 ~ 1975381 (+)
G78263 NA non-coding downstream 21163 1978383 ~ 1978728 (+)
G78264 NA non-coding downstream 22055 1979275 ~ 1979529 (+)
G78265 NA non-coding downstream 22622 1979842 ~ 1980074 (+)
G77695 NA other upstream 1003744 946521 ~ 952969 (+)
G77533 NA other upstream 1247164 708833 ~ 709549 (+)
G79309 NA other downstream 509545 2466765 ~ 2467171 (+)
G80062 NA other downstream 1626788 3584008 ~ 3584784 (+)
CI01000013_04051081_04064651 NA other downstream 2107713 4050837 ~ 4065829 (+)
G80845 NA other downstream 2877858 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 4099078 6049864 ~ 6060269 (+)

Expression


Co-expression Network