G78265


Basic Information

Item Value
gene id G78265
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 1979842 ~ 1980074 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU89176
CCACCTTTCATATAAAGACAGAAACTTTTCATAATATATTCTGAAATGTGTGATATTTAAGTGCAAAGACAAACTTAAATCCTTTACCCATGTCTCAGTAGTCCACATTAGAAAACAAGCTGCTTTCAATTACAGACAGCAAGTACACACTCTGAATCTCTCTCCCTCCCTCCTTCTGTCTTTCCCATCTCTTTTCTTCAGCTTTGGCTCTTTTGAAAACATTTATATTTCCT

Function

NR:

description
PREDICTED: tryptophan--tRNA ligase, cytoplasmic

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89176 True 233 lncRNA 0.36 1 1979842 1980074

Neighbor

gene id symbol gene type direction distance location
CI01000013_01950237_01964249 NA coding upstream 15552 1950015 ~ 1964290 (+)
CI01000013_01762491_01764612 NA coding upstream 215037 1761758 ~ 1764805 (+)
CI01000013_01629280_01635701 NA coding upstream 344070 1629228 ~ 1635772 (+)
CI01000013_01443540_01469011 CHD2 coding upstream 510766 1443540 ~ 1469076 (+)
CI01000013_01405290_01429838 NA coding upstream 549529 1405290 ~ 1430313 (+)
CI01000013_01989323_01993472 NR2F2.L, NR2F2 coding downstream 8457 1988531 ~ 1994075 (+)
CI01000013_02033469_02034368 NA coding downstream 53041 2033115 ~ 2034738 (+)
CI01000013_02081079_02127936 NA coding downstream 100592 2080666 ~ 2128269 (+)
CI01000013_02386700_02394730 NA coding downstream 406274 2386348 ~ 2395296 (+)
CI01000013_02409027_02409452 NA coding downstream 427232 2407306 ~ 2409607 (+)
G78264 NA non-coding upstream 313 1979275 ~ 1979529 (+)
G78263 NA non-coding upstream 1114 1978383 ~ 1978728 (+)
G78260 NA non-coding upstream 4461 1975060 ~ 1975381 (+)
G78254 NA non-coding upstream 14419 1965163 ~ 1965423 (+)
G78247 NA non-coding upstream 22622 1956713 ~ 1957220 (+)
G79075 NA non-coding downstream 150444 2130518 ~ 2130751 (+)
G79232 NA non-coding downstream 323243 2303317 ~ 2303695 (+)
G79241 NA non-coding downstream 336656 2316730 ~ 2316943 (+)
G79185 NA non-coding downstream 391656 2371730 ~ 2385188 (+)
G79194 NA non-coding downstream 439447 2419521 ~ 2420107 (+)
G77695 NA other upstream 1026873 946521 ~ 952969 (+)
G77533 NA other upstream 1270293 708833 ~ 709549 (+)
G79309 NA other downstream 486691 2466765 ~ 2467171 (+)
G80062 NA other downstream 1603934 3584008 ~ 3584784 (+)
CI01000013_04051081_04064651 NA other downstream 2084859 4050837 ~ 4065829 (+)
G80845 NA other downstream 2855004 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 4076224 6049864 ~ 6060269 (+)

Expression


Co-expression Network