G79075


Basic Information

Item Value
gene id G79075
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 2130518 ~ 2130751 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU90080
CCAACAGCTTGATCTTGTGTCACTCTGAGGGTATAGGACTCTAGTCTCGCTCTCCTTTTGTCTTTGAAAGCTAAATGGTTAATTGTAATGGATAAAAAGGGGTTTAAGTGGGAGGCGTTTCTCGAGAAAAGAGTCTGGATGCGAAATAAAGTACATGAAAAGCTATTGAGGATAATAAAATTAGATATGGGGGGGAAAAGAGATTTAGAAATGAGCAAGGCAAAAATAGAGGAG

Function

NR:

description
PREDICTED: trimeric intracellular cation channel type A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU90080 True 234 lncRNA 0.39 1 2130518 2130751

Neighbor

gene id symbol gene type direction distance location
CI01000013_02081079_02127936 NA coding upstream 2249 2080666 ~ 2128269 (+)
CI01000013_02033469_02034368 NA coding upstream 95780 2033115 ~ 2034738 (+)
CI01000013_01989323_01993472 NR2F2.L, NR2F2 coding upstream 136443 1988531 ~ 1994075 (+)
CI01000013_01950237_01964249 NA coding upstream 166228 1950015 ~ 1964290 (+)
CI01000013_01762491_01764612 NA coding upstream 365713 1761758 ~ 1764805 (+)
CI01000013_02386700_02394730 NA coding downstream 255597 2386348 ~ 2395296 (+)
CI01000013_02409027_02409452 NA coding downstream 276555 2407306 ~ 2409607 (+)
CI01000013_02411870_02429950 NA coding downstream 279676 2410427 ~ 2429957 (+)
CI01000013_02510121_02510417 NA coding downstream 379332 2510083 ~ 2513164 (+)
CI01000013_02528016_02529126 NA coding downstream 396697 2527448 ~ 2529246 (+)
G78265 NA non-coding upstream 150444 1979842 ~ 1980074 (+)
G78264 NA non-coding upstream 150989 1979275 ~ 1979529 (+)
G78263 NA non-coding upstream 151790 1978383 ~ 1978728 (+)
G78260 NA non-coding upstream 155137 1975060 ~ 1975381 (+)
G78254 NA non-coding upstream 165095 1965163 ~ 1965423 (+)
G79232 NA non-coding downstream 172566 2303317 ~ 2303695 (+)
G79241 NA non-coding downstream 185979 2316730 ~ 2316943 (+)
G79185 NA non-coding downstream 240979 2371730 ~ 2385188 (+)
G79194 NA non-coding downstream 288770 2419521 ~ 2420107 (+)
G79290 NA non-coding downstream 305691 2436442 ~ 2436843 (+)
G77695 NA other upstream 1177549 946521 ~ 952969 (+)
G77533 NA other upstream 1420969 708833 ~ 709549 (+)
G79309 NA other downstream 336014 2466765 ~ 2467171 (+)
G80062 NA other downstream 1453257 3584008 ~ 3584784 (+)
CI01000013_04051081_04064651 NA other downstream 1934182 4050837 ~ 4065829 (+)
G80845 NA other downstream 2704327 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 3925547 6049864 ~ 6060269 (+)

Expression


Co-expression Network