G79290


Basic Information

Item Value
gene id G79290
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 2436442 ~ 2436843 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU90308
GGCAAATAGGTGTTTAAATGGAGAAAAAAACCTTGGGAGAAACCAGGCTTAGTCGGGGGACCAGTTCTCCTCTGGCCAACAGTGCTTTGTTACGATTCAGGTAGCTATCATAAGTCCGACAAGATCGCAACATTCAAAGTATTTATTCCAGTTCCATCCAATTGAGGATCGTATTCATCACGCCGGTATGGACGGTTGTTGAGGAACTGTGTCGTGGCTGTCGTGTCGATGAGGCCCTCACAGTGGATGATCTAGTTGACTCAATCTCTGCTGATACTTCAGGGCTGCGTTGTGGTCGTGTCAAGGTGCAGGTCCTTGGTCTCACCTGTATACGGCCCGGATCCGGTTGACTACGGTGAACCTCGGGATAACCAGAAAGACTAATATTAGCGTAGATGCCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU90308 True 402 lncRNA 0.49 1 2436442 2436843

Neighbor

gene id symbol gene type direction distance location
CI01000013_02411870_02429950 NA coding upstream 6485 2410427 ~ 2429957 (+)
CI01000013_02409027_02409452 NA coding upstream 26835 2407306 ~ 2409607 (+)
CI01000013_02386700_02394730 NA coding upstream 41146 2386348 ~ 2395296 (+)
CI01000013_02081079_02127936 NA coding upstream 308173 2080666 ~ 2128269 (+)
CI01000013_02033469_02034368 NA coding upstream 401704 2033115 ~ 2034738 (+)
CI01000013_02510121_02510417 NA coding downstream 73240 2510083 ~ 2513164 (+)
CI01000013_02528016_02529126 NA coding downstream 90605 2527448 ~ 2529246 (+)
CI01000013_02656037_02664145 HSF4 coding downstream 219194 2656037 ~ 2664398 (+)
CI01000013_02666598_02669821 NUDT21, CPSF5, NUDT21.L coding downstream 229755 2666598 ~ 2669821 (+)
CI01000013_02685665_02686639 NA coding downstream 245624 2682467 ~ 2686835 (+)
G79194 NA non-coding upstream 16335 2419521 ~ 2420107 (+)
G79185 NA non-coding upstream 51254 2371730 ~ 2385188 (+)
G79241 NA non-coding upstream 119499 2316730 ~ 2316943 (+)
G79232 NA non-coding upstream 132747 2303317 ~ 2303695 (+)
G79075 NA non-coding upstream 305691 2130518 ~ 2130751 (+)
G79291 NA non-coding downstream 805 2437648 ~ 2437854 (+)
G79303 NA non-coding downstream 20545 2457388 ~ 2457601 (+)
G79310 NA non-coding downstream 32040 2468883 ~ 2469113 (+)
G79332 NA non-coding downstream 89263 2526106 ~ 2526930 (+)
G77695 NA other upstream 1483473 946521 ~ 952969 (+)
G77533 NA other upstream 1726893 708833 ~ 709549 (+)
G79309 NA other downstream 29922 2466765 ~ 2467171 (+)
G80062 NA other downstream 1147165 3584008 ~ 3584784 (+)
CI01000013_04051081_04064651 NA other downstream 1628090 4050837 ~ 4065829 (+)
G80845 NA other downstream 2398235 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 3619455 6049864 ~ 6060269 (+)

Expression


Co-expression Network