LOC103033900


Basic Information

Item Value
gene id LOC103033900
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172608.1
NCBI id APWO02002206.1
chromosome length 232625
location 89227 ~ 131093 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU391689
CCTCTCCAGACTGACCGATGAGGAGGCCCGGCATGTGTATCAGGTGGTCCAGAGGGATTTCAGCCTCCGCaaaaaagaagaggagagaCTGGGAGATCTGAAGACTAAAATTGTGAAAgaagacagtaagagagagctGCTGGGCTACCAGTCCACCCTCAGCGACTCACTCTGTATACACTGCTTACGACCATTCAAGTTCCTGCTCAACAC
>XM_022664238.1
TGTGCCCCAATTCTAgaattatatttgtttttttcatccAATGATCATCAGAATGTTAgtttttatgaataaatacaGTGGTGTATGAGATATAACAGTGCTTTATGTTAAGATCAGTGTGAATGTGTTCAGCTGTGTTTGACTGTTGCGAGGTGTGTACTGAAGCGGTGTGTAATATTGAAAGTTGATGTTTTTACAGGTCTCTCTGCTGCCACCAGAAAATCATAATGATGACCACTCTGAGTGACGGGACAAAACTAGACCTCTCCAGACTGACCGATGAGGAGGCCCGGCATGTGTATCAGGTGGTCCAGAGGGATTTCAGCCTCCGCaaaaaagaagaggagagaCTGGGAGATCTGAAGACTAAAATTGTGAAAgaagacagtaagagagagctGCTGGGCTACCAGTCCACCCTCAGCGACTCACTCTGTATACACTGCTTACGACCATTCAAGTTCCTGCTCAACACTAAACACCAGTGCCTGGACTGTAAGTTCTTTGTGTGTAAGGCCTGCAGCCGCTTCAACAAGAAGGATAACGGCTGGGTGTGTGATCCGTGCCAATCAGCCAGACTTTTGAAAATCGGAACGCTAGAATGGTTCCATGAAAATGTACGTTCTCGATTCAAGCGTTTCGGCAGTGCCAAAGTGATGAAGTCGCTCTACAAGAGGCTTAGTGAAGAACGAACCTTTTCCCAACCAGACCTGAGAGAGGATGACACCTACTGCCTGCCTGATGTTCACAGAcactctctctgcagtcaggagGATGAGCAGTCTGATCACGTGGGCCGGGATCACTACAGACTGaACAAGAAAGGCAAGCGGCTGCTCCTAGTCGACCCTCAGGACTTCAAACTTGGGACTGATCACTCCATCCACCCTTATCGCCATTCTTTTAAGAATGAGCGGCCTGATCCAGAGGAGGACTGGACTACCGTGTGTAGGCAGATCCTTGAGCGTAGACGAGATGGActggaggagaggaagaaggggaTTCACCACAGCAGCCGAAGCCTCGATAAACCTTTCCACTTTGATGACTGCACTTACCCTGAGAATAAGATGGTACGTGCTTGCTCCCTCTCGAAGATGAGCCATTCTTCAGCCGGCAGTGCTAATTATGGAGCGTTCCGCGAGCTTCCGTACAGCGTGGAGGACTCGGAGGAGGACGATGCAGACAGTTACCAAAACTACCTGCCTTCTGAGCCACTGAACTGGGAATACTCTCCAGATGGGGTTCCACCACAGATCACTGAGCTGAATAAGCGTATGTCAGCTATTGAAACCCTGCTTGGCCGTTTGGAACAGAAAATTACTGTACCAAACCACCCGCTGTCTCTACTGGAGCAGACCCAGCCTGCTGAGGAGGCATTGTCTCAGGCAGAccaggaggagctggagctgaagaaGAAGCTGGAGGAGCTCACTGAAAATATCAGTGATAAATCTTCAGATGAAGAGGAAATGATCAGGCTGAAAGATGACGTAAAGCCGCTGGGAGGAAGCAGTCGTGAATGTTCATTAATCACGAGAAAAGAAACTGCAGCTCTGGATAAAGACAGCTTTACCTCGGATGAGCAGAAGAGGCGGAGTTCATGTGAGTTGTCTCAGCTGGAGAGCAGGGTGGCCTTGACTGTGGCCAGTGTCCAGAGCACCAAGAGTGGGGTCACGGACATTCAGAACAGAATTGCTGTGTTGAGTGCAACAGCTGAGGAGAAGCCCTGGAAGAAGGCACCACTTTCCTGTGAAAGAAGAATGTCTCATGAATTTCCCatcaGAGCCAGGCACACCATGGGGTCCCTGAGGAAGCTCAGTATCAtatagaactgtgtctgtggtccTGAAGATTCTCC

Function

GO: NA

KEGG:

id description
K22235 MLPH; melanophilin

RNA

RNA id representative length rna type GC content exon number start site end site
TU391689 False 213 lncRNA 0.51 2 89489 100718
XM_022664238.1 True 1861 mRNA 0.49 14 89227 131093

Neighbor

gene id symbol gene type direction distance location
LOC103034659 NA coding downstream 35045 166138 ~ 179793 (+)
trnac-gca_11 NA coding downstream 71617 202710 ~ 202781 (+)
trnac-gca_12 NA coding downstream 72067 203160 ~ 203231 (+)
trnac-gca_13 NA coding downstream 72346 203439 ~ 203510 (+)
trnac-gca_14 NA coding downstream 72454 203547 ~ 203618 (+)
G285043 NA non-coding upstream 21343 65790 ~ 67884 (+)
G285037 NA non-coding upstream 44606 43647 ~ 44621 (+)
G285052 NA non-coding downstream 1678 132771 ~ 134753 (+)

Expression


Co-expression Network