LOC103034659


Basic Information

Item Value
gene id LOC103034659
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172608.1
NCBI id APWO02002206.1
chromosome length 232625
location 166138 ~ 179793 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022664237.1
AAAGGTCTCGATACTAAAGTGGTCCAGATCCGGATCTGACTCCGGTTCAGACAGAGGACACGCCCGCTGTATCCGCGCAACGACTTCAGACCAACAGGGTTGAGTAAAGTACGCGGGGACAAGCGAGAGCACCATTGGAACATCACCGCGAACCGTTATCTCTGAGCCGATCCTGAGAAGCCGAGATGTTAATGGAGGGGCCCGTGTGTCTGATCAGCACTGACTCTGAGGGACAGCTGTCCGTTCAGAAAGAGGCTAAAGATATTCTGGATGGGATAACCAGTCCGGTGGTGGTGGTGTCTGTGGTTGGACTCTACAGGACAGGGAAGTCTTACCTCATGAACCGCCTGGCAGGAAAACAAAGAGGTTTTGCTCTGGGCAGCACTATTGAGTCAAAAACTAAAGGGATCTGGATGTGGTGTGTGCCACACCCTCATAAAAAAGAACACACCTTGGTGTTGCTGGATACAGAGGGACTTGGGGACATAGACAAGGGAGATGAAAAGCATGACACCTGGATCTTCTGCCTGGCAGTTCTGCTCAGCAGCACTCTGGTCTACAACAGCTTAGGAGTGATAGACAACATGGCACTGGAGAGGTTACACTATGTAACAGAACTTACTGAGAATATTCGGGTGAAAGCCCGTAAGGGCAGTGACGAGGATGAGTCGGCAGAGTTCATGCGCATCTTCCCTTCTTTTATCTGGTCTGTGCGGGACTTTACTCTGGAGCTAAAAAAAGACAACCGTGACATCACCGCAGATGAATACTTGGAGACAGCGCTGGAGCTCAAAACAGgtAGTTCTGTCAAGATTAACAATTACAACCTGCCCCGGAGCTGTTTGCGGAACTTTTTCGCCGAGCGGCGGTGTTTTGTGTTCAGGAGGCCAGCGGCAGATGAAGACCTGAGGAGGATGGAAGAGCTGACAGAGGAGGAGCTTGAACCAGAGTTTCTGAAGCAGACCCAAGAGTTCTGTAACTATGTGTTCAGCAACACCAAACCCAAAACCCTCACCGGAGGACGCACCCTCTCCGGCACTGtTCTGGGCAGTCTTGCGGAGGTGTATGTGGAAGCCATCCGAAGCGGGCGTGTTCCCTGCCTGGAGAATGCAGTGGAGGCTCTGGCCCAGATCCAGAATGGACGTGCAGTGGAACAGGCTATGCAGGCTTATTTAACTGAAGTACTTGATTCTGCATGCTTTCCACTGGACCCAGTTCAGCTTTCCGACATCCACACACAAGCTGAGAGGAAGGCGGTGGAAGTCTTCATCAGCATTTCCTTCAATGATGCACAGCAAACAGCACAGCTGGATCTCATGAGGAAAATCCAGAGTGAGTATGAGTGTTTTTGTGGCCAGAACAAAAACCAGTGTGAGATTCAGTGTGGTGAGGAGCTGAGAGAGGTGTTTGCTCCTCTGGAGGAAGGTCTAAGAGACGGCACCTTCATGCTGCCTGGAGGGTATCGGAAATATCGGGACACAGTCCTGCGCCTCACTGCGGAGTACagaaaacgcacacacacactgttcatgtgtgagGAAGTGTTAAATGAGTATTTGACGGAAAAAGATGAGCGTGGGAAGAATATCCTGGCAGCTGATCAGTATCTCTCTCAGGCAGATCAGAAGATGGAAGagGAATGTCTGAAGAGAGAAGCTGTAGAACAGAAGCAGAGGGCTCTAGAAGAGCAGAACCGGCAGCAGGAGCAGGTGTTCCGTGACCAGCAGAGAACCTACGAGCAGCATGTGACCCAGCTGCTGGAACGtctggagagagagcgagagcgggCGAGAGAGGATactcagcgggtggtgcatgcCAAACTAAATGAGCAGAAGGCTCTGTTGGAGGTAGGATTTAAGAAGGAGTCAGATCTGCTGCAGAAGGAGATTGACAATCTGAAGAAGGAGATGAACAACGAGGACAAGTCAAAGCGCTCCACCCTCAGTCAGGTGGTAGACACCGTAGGGCAAGCTGCCACTCTCTTCCTGCCCGGAATTGCCTGCAAAGCTGCGGGCTTCTTGACCTCCTTATTTTCCCGATGGCTGTGATGAATTAGCAGTTTACAGCGGTAAGCTGCAGGGGGCGCCATCTTATAGTGTACTGCAACAATAAACTAAACCGCGGTTGAAATTTTACCCAGAATAAGTGTCATGcgtttattaataaacagtcattacAGGCTTC

Function

GO: NA

KEGG:

id description
K20899 GBP1_3_4_7; guanylate-binding protein 1/3/4/7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022664237.1 True 2187 mRNA 0.51 12 166138 179793

Neighbor

gene id symbol gene type direction distance location
trnac-gca_11 NA coding downstream 22917 202710 ~ 202781 (+)
trnac-gca_12 NA coding downstream 23367 203160 ~ 203231 (+)
trnac-gca_13 NA coding downstream 23646 203439 ~ 203510 (+)
trnac-gca_14 NA coding downstream 23754 203547 ~ 203618 (+)
trnac-gca_15 NA coding downstream 23862 203655 ~ 203726 (+)
G285052 NA non-coding upstream 31385 132771 ~ 134753 (+)
G285049 NA non-coding upstream 47505 117555 ~ 118633 (+)
G285043 NA non-coding upstream 98254 65790 ~ 67884 (+)
G285037 NA non-coding upstream 121517 43647 ~ 44621 (+)
LOC103033900 NA other upstream 35045 89227 ~ 131093 (+)

Expression


Co-expression Network