trnac-gca_18


Basic Information

Item Value
gene id trnac-gca_18
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172608.1
NCBI id APWO02002206.1
chromosome length 232625
location 204150 ~ 204221 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnac-gca_18
GGGGGTATAGCTCAGTGGTAGAGCATTTGACTGCAGATCAAGAGGTCCCCGGTTCAAATCCGGGTGCCCCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnac-gca_18 True 72 tRNA 0.57 1 204150 204221

Neighbor

gene id symbol gene type direction distance location
trnac-gca_17 NA coding upstream 208 203871 ~ 203942 (+)
trnac-gca_16 NA coding upstream 316 203763 ~ 203834 (+)
trnac-gca_15 NA coding upstream 424 203655 ~ 203726 (+)
trnac-gca_14 NA coding upstream 532 203547 ~ 203618 (+)
trnac-gca_13 NA coding upstream 640 203439 ~ 203510 (+)
trnac-gca_19 NA coding downstream 379 204600 ~ 204671 (+)
trnac-gca_20 NA coding downstream 658 204879 ~ 204950 (+)
trnac-gca_21 NA coding downstream 11301 215522 ~ 215593 (+)
trnac-aca NA coding downstream 12335 216556 ~ 216627 (+)
trnac-aca_1 NA coding downstream 12492 216713 ~ 216784 (+)
G285052 NA non-coding upstream 69397 132771 ~ 134753 (+)
G285049 NA non-coding upstream 85517 117555 ~ 118633 (+)
G285043 NA non-coding upstream 136266 65790 ~ 67884 (+)
G285037 NA non-coding upstream 159529 43647 ~ 44621 (+)
LOC103033900 NA other upstream 73057 89227 ~ 131093 (+)

Expression


Co-expression Network