trnac-gca_22


Basic Information

Item Value
gene id trnac-gca_22
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172608.1
NCBI id APWO02002206.1
chromosome length 232625
location 216870 ~ 216941 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnac-gca_22
GGGGGCATAGCTCAGTGGTAGAGCATTTGACTGCAGATCAAGAGGTCCCCGGTTCAAATCCGGGTGCCCCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnac-gca_22 True 72 tRNA 0.58 1 216870 216941

Neighbor

gene id symbol gene type direction distance location
trnac-aca_1 NA coding upstream 86 216713 ~ 216784 (+)
trnac-aca NA coding upstream 243 216556 ~ 216627 (+)
trnac-gca_21 NA coding upstream 1277 215522 ~ 215593 (+)
trnac-gca_20 NA coding upstream 11920 204879 ~ 204950 (+)
trnac-gca_19 NA coding upstream 12199 204600 ~ 204671 (+)
trnac-gca_23 NA coding downstream 290 217231 ~ 217302 (+)
trnac-aca_2 NA coding downstream 447 217388 ~ 217459 (+)
trnac-aca_3 NA coding downstream 808 217749 ~ 217820 (+)
trnac-aca_4 NA coding downstream 1169 218110 ~ 218181 (+)
trnac-gca_24 NA coding downstream 1423 218364 ~ 218435 (+)
G285052 NA non-coding upstream 82117 132771 ~ 134753 (+)
G285049 NA non-coding upstream 98237 117555 ~ 118633 (+)
G285043 NA non-coding upstream 148986 65790 ~ 67884 (+)
G285037 NA non-coding upstream 172249 43647 ~ 44621 (+)
LOC103033900 NA other upstream 85777 89227 ~ 131093 (+)

Expression


Co-expression Network