G286121


Basic Information

Item Value
gene id G286121
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172643.1
NCBI id APWO02002241.1
chromosome length 143949
location 47604 ~ 48563 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU393155
TTTAACCCTTATGCCCTCCTCGggcatttttgtacatttttttcaacttttttttttcatttggtgATCATTTTGGCTATGTTGCAGCTAGTGGCATGAATTTTTGCAGAAAATCTGctttttcattacatttttgaaaTCTATTGTCTTTTACTCTTACACGTCATTCATACTCTCTGGATGCATTTTGCACCCTCTGGACACCTTCGTGGCAAAAATGTACACGCACCAAAAAACTGCTCTTAAATCATtatacatcaatatttttttttgcttttttttttcataaatcacTTAATCAATTTCAGACCTACTCAAAACtaccaaacattaaataattttcaggattttaaccctttaaatgacagtttaattatttgaattattgctttttgttttgcaaaaaaacacgaaaaatgtattattttccaTAAAACAAACAGTGGACAGATGGGGAATTGGTGGTAATTACAGTCTTGGATATGTCAAAGATTAGCAACAAAATTGTTttgattgcattattattttttatgtagtgcCAGATTTCAAATTTTGCACCCTCTGGACACCTTCGTGGCAAAAATGTACACGCACAAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU393155 True 599 lncRNA 0.31 2 47604 48563

Neighbor

gene id symbol gene type direction distance location
LOC111190604 NA coding upstream 26350 1043 ~ 21254 (+)
G286116 NA non-coding upstream 23082 24309 ~ 24522 (+)
G286129 NA non-coding downstream 56461 105024 ~ 107433 (+)
G286144 NA non-coding downstream 63775 112338 ~ 112752 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
eurasian perch (Perca fluviatilis) G15836 NA non-coding NC_053113.1 CM020910.1 8918024 ~ 8920817 (-)