Gene
RNA
| Item | Value |
|---|---|
| gene id | G79456 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000013 |
| NCBI id | null |
| chromosome length | 12551977 |
| location | 2783421 ~ 2783654 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU90500 | True | 234 | lncRNA | 0.35 | 1 | 2783421 | 2783654 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000013_02709871_02711692 | NA | coding | upstream | 70922 | 2709453 ~ 2712499 (+) |
| CI01000013_02692887_02696848 | NA | coding | upstream | 86401 | 2692443 ~ 2697020 (+) |
| CI01000013_02685665_02686639 | NA | coding | upstream | 96586 | 2682467 ~ 2686835 (+) |
| CI01000013_02666598_02669821 | NUDT21, CPSF5, NUDT21.L | coding | upstream | 113600 | 2666598 ~ 2669821 (+) |
| CI01000013_02656037_02664145 | HSF4 | coding | upstream | 119023 | 2656037 ~ 2664398 (+) |
| CI01000013_02815238_02816664 | NA | coding | downstream | 31526 | 2815180 ~ 2817323 (+) |
| CI01000013_02859975_02863496 | TMEM170A | coding | downstream | 76321 | 2859975 ~ 2863946 (+) |
| CI01000013_03019688_03044233 | TSNAXIP1, PARD6A | coding | downstream | 236034 | 3019688 ~ 3044374 (+) |
| CI01000013_03087239_03094115 | TSNAXIP1 | coding | downstream | 303585 | 3087239 ~ 3094458 (+) |
| CI01000013_03121085_03147061 | EDC4 | coding | downstream | 337431 | 3121085 ~ 3147622 (+) |
| G79448 | NA | non-coding | upstream | 7852 | 2775232 ~ 2775569 (+) |
| G79445 | NA | non-coding | upstream | 12070 | 2771082 ~ 2771351 (+) |
| G79444 | NA | non-coding | upstream | 12397 | 2770542 ~ 2771024 (+) |
| G79443 | NA | non-coding | upstream | 13074 | 2770022 ~ 2770347 (+) |
| G79442 | NA | non-coding | upstream | 13592 | 2769477 ~ 2769829 (+) |
| G79457 | NA | non-coding | downstream | 1608 | 2785262 ~ 2785791 (+) |
| G79458 | NA | non-coding | downstream | 2476 | 2786130 ~ 2786399 (+) |
| G79459 | NA | non-coding | downstream | 3322 | 2786976 ~ 2787413 (+) |
| G79460 | NA | non-coding | downstream | 5573 | 2789227 ~ 2790204 (+) |
| G79461 | NA | non-coding | downstream | 6641 | 2790295 ~ 2790520 (+) |
| G79309 | NA | other | upstream | 316250 | 2466765 ~ 2467171 (+) |
| G77695 | NA | other | upstream | 1830452 | 946521 ~ 952969 (+) |
| G77533 | NA | other | upstream | 2073872 | 708833 ~ 709549 (+) |
| G80062 | NA | other | downstream | 800354 | 3584008 ~ 3584784 (+) |
| CI01000013_04051081_04064651 | NA | other | downstream | 1281279 | 4050837 ~ 4065829 (+) |
| G80845 | NA | other | downstream | 2051424 | 4835078 ~ 4836232 (+) |
| CI01000013_06050285_06059640 | NA | other | downstream | 3272644 | 6049864 ~ 6060269 (+) |
| CI01000013_06076169_06080164 | NA | other | downstream | 3294908 | 6075400 ~ 6081684 (+) |
