G79465


Basic Information

Item Value
gene id G79465
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 2793457 ~ 2793885 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU90509
CTGTGGACACTTCACTGATGGACAAGAGAGAGAGGGATGCACTCAAAAAGAGGGATTAAAATCCTTCCCATGATCCCAAAAACAAACCTCGACAAGCAGTTCATTTTCTCTGTGCCTGGTATTATGCCACCAACTGTTTGTATCCTTGTTTCAATCAGCTCTTGGACGCAAAGCAAATAGTCGGACACGGCTCCCATCGCATGCTAGCAGCAGCTTATTGCGTGCAAATCCTTTTCTCAACCCGCCAAACACTTTTCCGATGTAATACCTGTAACATGTCAAATCCGTGGTTGCACAACTTCCGAGTCAGCAACTATGGAAACACAAACTGAGACTCGAGGGACACGATTTCATTAGGATTCCACTCACCTACAAAAGTACCCCAACCAGACTCCTATCGGCCAATCATGTCACGCTTTGAGGCTGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU90509 True 429 lncRNA 0.46 1 2793457 2793885

Neighbor

gene id symbol gene type direction distance location
CI01000013_02709871_02711692 NA coding upstream 80958 2709453 ~ 2712499 (+)
CI01000013_02692887_02696848 NA coding upstream 96437 2692443 ~ 2697020 (+)
CI01000013_02685665_02686639 NA coding upstream 106622 2682467 ~ 2686835 (+)
CI01000013_02666598_02669821 NUDT21, CPSF5, NUDT21.L coding upstream 123636 2666598 ~ 2669821 (+)
CI01000013_02656037_02664145 HSF4 coding upstream 129059 2656037 ~ 2664398 (+)
CI01000013_02815238_02816664 NA coding downstream 21295 2815180 ~ 2817323 (+)
CI01000013_02859975_02863496 TMEM170A coding downstream 66090 2859975 ~ 2863946 (+)
CI01000013_03019688_03044233 TSNAXIP1, PARD6A coding downstream 225803 3019688 ~ 3044374 (+)
CI01000013_03087239_03094115 TSNAXIP1 coding downstream 293354 3087239 ~ 3094458 (+)
CI01000013_03121085_03147061 EDC4 coding downstream 327200 3121085 ~ 3147622 (+)
G79464 NA non-coding upstream 556 2792686 ~ 2792901 (+)
G79462 NA non-coding upstream 2286 2790805 ~ 2791171 (+)
G79461 NA non-coding upstream 2937 2790295 ~ 2790520 (+)
G79460 NA non-coding upstream 3253 2789227 ~ 2790204 (+)
G79459 NA non-coding upstream 6044 2786976 ~ 2787413 (+)
G79466 NA non-coding downstream 1206 2795091 ~ 2795803 (+)
G79467 NA non-coding downstream 2444 2796329 ~ 2796576 (+)
G79468 NA non-coding downstream 4099 2797984 ~ 2799462 (+)
G79478 NA non-coding downstream 18802 2812687 ~ 2812889 (+)
G79479 NA non-coding downstream 19286 2813171 ~ 2813508 (+)
G79309 NA other upstream 326286 2466765 ~ 2467171 (+)
G77695 NA other upstream 1840488 946521 ~ 952969 (+)
G77533 NA other upstream 2083908 708833 ~ 709549 (+)
G80062 NA other downstream 790123 3584008 ~ 3584784 (+)
CI01000013_04051081_04064651 NA other downstream 1271048 4050837 ~ 4065829 (+)
G80845 NA other downstream 2041193 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 3262413 6049864 ~ 6060269 (+)
CI01000013_06076169_06080164 NA other downstream 3284677 6075400 ~ 6081684 (+)

Expression


Co-expression Network