G79466


Basic Information

Item Value
gene id G79466
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 2795091 ~ 2795803 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU90510
GGCATAGGGAGCAATGACAAACACTGCTTCAGGAAGCTTCGGAGCATAATGAATCAGCATGTCGAATCAGCGGTTCGAAGCGCCAAAGTCACGTGATTTCAGCAGTTTGGCGGTTTGACACGTGATCCGAATCATGTTTTGAAATCGCCATCACTACATAAGTCTTTATTTTGTTTTTTTTGGTGCACCAAAAATATTCTCATCGCTTTATAATATTAATATTGGACCACTGTAACCACATGAACTGATTTAAATATGTTTTTAGTACATTAATGGATCTTGAGAGAAGAAATGTCATTACTCCCTATGCAGGCCTCACGGAGCCATCGGATTTCGACAAAAATATCTCAATTTGCATTCCGAAGATGAATGAAGGTCTTACGTGGGTGAAACGGCATGAGGGTGAGTAATAAATCACATTATTTTCATTTTTGGGTGAACTAACCCTTTAATACTAGGTGGAAACAGGGCTAATGATTAGTTGATTAGTTGTTCAGGTAATGTCATTTTGCACATCCCTAAAGTGTGCACAAGCATATTTACACAAGCACACCTGCTGCAGATGGACATAAACAATGATTTTGCAAATGCAGCTGGCAGTTAAACATGTCTAAGTACATCAGAATTTCCTGTCCTATGCTCCCTTGACAGGCTTCATGTTCCTTTCAATCTCACACATACATAAACACGCTCCCATTCATACTGTCCGTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU90510 True 713 lncRNA 0.40 1 2795091 2795803

Neighbor

gene id symbol gene type direction distance location
CI01000013_02709871_02711692 NA coding upstream 82592 2709453 ~ 2712499 (+)
CI01000013_02692887_02696848 NA coding upstream 98071 2692443 ~ 2697020 (+)
CI01000013_02685665_02686639 NA coding upstream 108256 2682467 ~ 2686835 (+)
CI01000013_02666598_02669821 NUDT21, CPSF5, NUDT21.L coding upstream 125270 2666598 ~ 2669821 (+)
CI01000013_02656037_02664145 HSF4 coding upstream 130693 2656037 ~ 2664398 (+)
CI01000013_02815238_02816664 NA coding downstream 19377 2815180 ~ 2817323 (+)
CI01000013_02859975_02863496 TMEM170A coding downstream 64172 2859975 ~ 2863946 (+)
CI01000013_03019688_03044233 TSNAXIP1, PARD6A coding downstream 223885 3019688 ~ 3044374 (+)
CI01000013_03087239_03094115 TSNAXIP1 coding downstream 291436 3087239 ~ 3094458 (+)
CI01000013_03121085_03147061 EDC4 coding downstream 325282 3121085 ~ 3147622 (+)
G79465 NA non-coding upstream 1206 2793457 ~ 2793885 (+)
G79464 NA non-coding upstream 2190 2792686 ~ 2792901 (+)
G79462 NA non-coding upstream 3920 2790805 ~ 2791171 (+)
G79461 NA non-coding upstream 4571 2790295 ~ 2790520 (+)
G79460 NA non-coding upstream 4887 2789227 ~ 2790204 (+)
G79467 NA non-coding downstream 526 2796329 ~ 2796576 (+)
G79468 NA non-coding downstream 2181 2797984 ~ 2799462 (+)
G79478 NA non-coding downstream 16884 2812687 ~ 2812889 (+)
G79479 NA non-coding downstream 17368 2813171 ~ 2813508 (+)
G79481 NA non-coding downstream 20001 2815804 ~ 2816109 (+)
G79309 NA other upstream 327920 2466765 ~ 2467171 (+)
G77695 NA other upstream 1842122 946521 ~ 952969 (+)
G77533 NA other upstream 2085542 708833 ~ 709549 (+)
G80062 NA other downstream 788205 3584008 ~ 3584784 (+)
CI01000013_04051081_04064651 NA other downstream 1269130 4050837 ~ 4065829 (+)
G80845 NA other downstream 2039275 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 3260495 6049864 ~ 6060269 (+)
CI01000013_06076169_06080164 NA other downstream 3282759 6075400 ~ 6081684 (+)

Expression


Co-expression Network