trnat-agu_25



Basic Information


Item Value
gene id trnat-agu_25
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NW_019172695.1
NCBI id APWO02002293.1
chromosome length 373183
location 5625 ~ 5698 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence


>trnat-agu_25
GGCGCCGTGGCTTAGTTGGTTAAAGTGCCTGTCTAGTAAACAGGAGATcctgggttcgaatcccagcgGTGCCT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnat-agu_25 True 74 tRNA 0.55 1 5625 5698

Neighbor


gene id symbol gene type direction distance location
trnar-ucu_20 NA coding downstream 108 5428 ~ 5517 (-)
trnat-agu_24 NA coding downstream 505 5047 ~ 5120 (-)
trnar-ucu_19 NA coding downstream 685 4851 ~ 4940 (-)
trnat-agu_23 NA coding downstream 1082 4470 ~ 4543 (-)
trnar-ucu_18 NA coding downstream 1262 4274 ~ 4363 (-)
trnar-ucu_21 NA coding upstream 308 6006 ~ 6095 (-)
trnat-agu_26 NA coding upstream 504 6202 ~ 6275 (-)
trnar-ucu_22 NA coding upstream 885 6583 ~ 6672 (-)
trnat-agu_27 NA coding upstream 1081 6779 ~ 6852 (-)
trnar-ucu_23 NA coding upstream 1463 7161 ~ 7250 (-)
G287603 NA non-coding upstream 39932 45630 ~ 45862 (-)
G287604 NA non-coding upstream 48241 53939 ~ 54187 (-)
G287616 NA non-coding upstream 138486 144184 ~ 148507 (-)
G287614 LOC106930827 non-coding upstream 139303 145001 ~ 145794 (-)
G287618 NA non-coding upstream 173734 179432 ~ 179704 (-)
G287664 LOC107554731 other upstream 300692 306390 ~ 307501 (-)

Expression



Co-expression Network