G79596


Basic Information

Item Value
gene id G79596
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 3005981 ~ 3006270 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU90645
GTGGTATTTGATGAAAAAAATGTTTAAAATCTTTGCAAAAAGTTAAAGCAGATTTAAGGAACTGTCTATATTATTATAATTTTTTCCTGACAGAACATTCTAATCAGGATGCTGACAGTATATTGCAGAAGTACATCGAATTAGACATTATGGCCACTAGGTGGCAGAACATAATTACTTATGTCACCAGGGTAAAAAAAAAATTGTTAAAAAACACTGCCTGAATGAACAATTGTCTGTGTAAAATAATATGGAACCAAGTAAACTTTTTTAACACATTTTTTTTTTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU90645 True 290 lncRNA 0.29 1 3005981 3006270

Neighbor

gene id symbol gene type direction distance location
CI01000013_02859975_02863496 TMEM170A coding upstream 142035 2859975 ~ 2863946 (+)
CI01000013_02815238_02816664 NA coding upstream 188658 2815180 ~ 2817323 (+)
CI01000013_02709871_02711692 NA coding upstream 293482 2709453 ~ 2712499 (+)
CI01000013_02692887_02696848 NA coding upstream 308961 2692443 ~ 2697020 (+)
CI01000013_02685665_02686639 NA coding upstream 319146 2682467 ~ 2686835 (+)
CI01000013_03019688_03044233 TSNAXIP1, PARD6A coding downstream 13418 3019688 ~ 3044374 (+)
CI01000013_03087239_03094115 TSNAXIP1 coding downstream 80969 3087239 ~ 3094458 (+)
CI01000013_03121085_03147061 EDC4 coding downstream 114815 3121085 ~ 3147622 (+)
CI01000013_03186643_03190449 NRN1LA coding downstream 180373 3186643 ~ 3190677 (+)
CI01000013_03225714_03236717 FAN1 coding downstream 219444 3225714 ~ 3237045 (+)
G79508 NA non-coding upstream 6232 2975598 ~ 2999749 (+)
G79593 NA non-coding upstream 8586 2996552 ~ 2997395 (+)
G79588 NA non-coding upstream 17080 2987377 ~ 2988901 (+)
G79548 NA non-coding upstream 116415 2888539 ~ 2889566 (+)
G79546 NA non-coding upstream 120482 2885269 ~ 2885499 (+)
G79598 NA non-coding downstream 5392 3011662 ~ 3012068 (+)
G79600 NA non-coding downstream 6941 3013211 ~ 3013753 (+)
G79601 NA non-coding downstream 40966 3047236 ~ 3047532 (+)
G79625 NA non-coding downstream 106343 3112613 ~ 3113067 (+)
G79503 NA non-coding downstream 186084 3192354 ~ 3194808 (+)
G79309 NA other upstream 538810 2466765 ~ 2467171 (+)
G77695 NA other upstream 2053012 946521 ~ 952969 (+)
G77533 NA other upstream 2296432 708833 ~ 709549 (+)
G80062 NA other downstream 577738 3584008 ~ 3584784 (+)
CI01000013_04051081_04064651 NA other downstream 1058663 4050837 ~ 4065829 (+)
G80845 NA other downstream 1828808 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 3050028 6049864 ~ 6060269 (+)
CI01000013_06076169_06080164 NA other downstream 3072292 6075400 ~ 6081684 (+)

Expression


Co-expression Network