G79600


Basic Information

Item Value
gene id G79600
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 3013211 ~ 3013753 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU90649
ACTCCACAGACCTCAAGCCTCAGCAGGAAATTGTTGGGTCTAGACCAAATGCAGAGCAGATCAAAGTACTGACCGTTGCGATGAGCAACCAGGATTATCATCTCCCTCCACATTCCGGCATTCTTCTGCTTTCCATCATCATCTGAGCTGGAGAGAGGCCCGTGGAGAGGGTGTGCAGAGCAGAGACTGGACACACAACAAGGGAAACACAAGAAAGGAAGGTTTAATTAAGACCGGCGGCTCAAATAGAGTAAAGGGAAAAATATGGGGGAAAAACAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU90649 True 280 lncRNA 0.48 2 3013211 3013753

Neighbor

gene id symbol gene type direction distance location
CI01000013_02859975_02863496 TMEM170A coding upstream 149265 2859975 ~ 2863946 (+)
CI01000013_02815238_02816664 NA coding upstream 195888 2815180 ~ 2817323 (+)
CI01000013_02709871_02711692 NA coding upstream 300712 2709453 ~ 2712499 (+)
CI01000013_02692887_02696848 NA coding upstream 316191 2692443 ~ 2697020 (+)
CI01000013_02685665_02686639 NA coding upstream 326376 2682467 ~ 2686835 (+)
CI01000013_03019688_03044233 TSNAXIP1, PARD6A coding downstream 5935 3019688 ~ 3044374 (+)
CI01000013_03087239_03094115 TSNAXIP1 coding downstream 73486 3087239 ~ 3094458 (+)
CI01000013_03121085_03147061 EDC4 coding downstream 107332 3121085 ~ 3147622 (+)
CI01000013_03186643_03190449 NRN1LA coding downstream 172890 3186643 ~ 3190677 (+)
CI01000013_03225714_03236717 FAN1 coding downstream 211961 3225714 ~ 3237045 (+)
G79598 NA non-coding upstream 1143 3011662 ~ 3012068 (+)
G79596 NA non-coding upstream 6941 3005981 ~ 3006270 (+)
G79508 NA non-coding upstream 13462 2975598 ~ 2999749 (+)
G79593 NA non-coding upstream 15816 2996552 ~ 2997395 (+)
G79588 NA non-coding upstream 24310 2987377 ~ 2988901 (+)
G79601 NA non-coding downstream 33483 3047236 ~ 3047532 (+)
G79625 NA non-coding downstream 98860 3112613 ~ 3113067 (+)
G79503 NA non-coding downstream 178601 3192354 ~ 3194808 (+)
G79639 NA non-coding downstream 188158 3201911 ~ 3202313 (+)
G79909 NA non-coding downstream 351789 3365542 ~ 3365893 (+)
G79309 NA other upstream 546040 2466765 ~ 2467171 (+)
G77695 NA other upstream 2060242 946521 ~ 952969 (+)
G77533 NA other upstream 2303662 708833 ~ 709549 (+)
G80062 NA other downstream 570255 3584008 ~ 3584784 (+)
CI01000013_04051081_04064651 NA other downstream 1051180 4050837 ~ 4065829 (+)
G80845 NA other downstream 1821325 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 3042545 6049864 ~ 6060269 (+)
CI01000013_06076169_06080164 NA other downstream 3064809 6075400 ~ 6081684 (+)

Expression


Co-expression Network