G79601


Basic Information

Item Value
gene id G79601
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 3047236 ~ 3047532 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU90650
CGTGTATTAGGTTAATATAATGTAGAGTAAATGTTTCTATTATTTTCTAATAGGCCTACATCCATTAATGCTGAGTGTCAGTTGCTCTAATCATGTCTTACATGCACATGTTGCATTACTATTATTAAACTTTGGTTTGATTGCACTTAGCACTTGATTTCTATTATTCATTATTATTATTATTATTACTATACTTTACTACTGAAATTCCTTTGAATAAATTAATAAATATGATAAATGAATTCATGCAAATGCAGGTGCAATAAGGGAGGCAGCACATACAGACTTGACCTGATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU90650 True 297 lncRNA 0.30 1 3047236 3047532

Neighbor

gene id symbol gene type direction distance location
CI01000013_03019688_03044233 TSNAXIP1, PARD6A coding upstream 2862 3019688 ~ 3044374 (+)
CI01000013_02859975_02863496 TMEM170A coding upstream 183290 2859975 ~ 2863946 (+)
CI01000013_02815238_02816664 NA coding upstream 229913 2815180 ~ 2817323 (+)
CI01000013_02709871_02711692 NA coding upstream 334737 2709453 ~ 2712499 (+)
CI01000013_02692887_02696848 NA coding upstream 350216 2692443 ~ 2697020 (+)
CI01000013_03087239_03094115 TSNAXIP1 coding downstream 39707 3087239 ~ 3094458 (+)
CI01000013_03121085_03147061 EDC4 coding downstream 73553 3121085 ~ 3147622 (+)
CI01000013_03186643_03190449 NRN1LA coding downstream 139111 3186643 ~ 3190677 (+)
CI01000013_03225714_03236717 FAN1 coding downstream 178182 3225714 ~ 3237045 (+)
CI01000013_03241607_03258684 MBTPS1 coding downstream 194075 3241607 ~ 3259203 (+)
G79600 NA non-coding upstream 33483 3013211 ~ 3013753 (+)
G79598 NA non-coding upstream 35168 3011662 ~ 3012068 (+)
G79596 NA non-coding upstream 40966 3005981 ~ 3006270 (+)
G79508 NA non-coding upstream 47487 2975598 ~ 2999749 (+)
G79625 NA non-coding downstream 65081 3112613 ~ 3113067 (+)
G79503 NA non-coding downstream 144822 3192354 ~ 3194808 (+)
G79639 NA non-coding downstream 154379 3201911 ~ 3202313 (+)
G79909 NA non-coding downstream 318010 3365542 ~ 3365893 (+)
G79976 NA non-coding downstream 326396 3373928 ~ 3374243 (+)
G79309 NA other upstream 580065 2466765 ~ 2467171 (+)
G77695 NA other upstream 2094267 946521 ~ 952969 (+)
G77533 NA other upstream 2337687 708833 ~ 709549 (+)
G80062 NA other downstream 536476 3584008 ~ 3584784 (+)
CI01000013_04051081_04064651 NA other downstream 1017401 4050837 ~ 4065829 (+)
G80845 NA other downstream 1787546 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 3008766 6049864 ~ 6060269 (+)
CI01000013_06076169_06080164 NA other downstream 3031030 6075400 ~ 6081684 (+)

Expression


Co-expression Network