G79625


Basic Information

Item Value
gene id G79625
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 3112613 ~ 3113067 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU90674
TTGGAAAATGCAAGGTCTTCCCTGAAAGAGACAACGTCTGGATGGGAGCATATGTTGTTCTAGAACTTGGATATACCTTTCAGCATTGATGGTGCCTTTCCAGATGTGTAAGCTGCCCATGCCACACGCACTCATGCAACCCCATACCATCAGAGATGCAGGCTTCTGAACTGAGCGCTGATGACAACTTGGGTTGTCCTTGTCCTCTTTAGTCCGGATGACATGGCGTCCTAGTTTTCCAAAAAGAACTTGAAGTTTTGATTTGTCTGACCACAGAACAGTTTTCCACTTTGCCACAGTCCATTTTAAATGAGCCTTGGCCCAGAGAAAACGCCTGCGCTTCTGGATCATGTTTAGATACCGACAATGTTTTCTGGAAGTATTCCTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU90674 True 390 lncRNA 0.46 2 3112613 3113067

Neighbor

gene id symbol gene type direction distance location
CI01000013_03087239_03094115 TSNAXIP1 coding upstream 18155 3087239 ~ 3094458 (+)
CI01000013_03019688_03044233 TSNAXIP1, PARD6A coding upstream 68239 3019688 ~ 3044374 (+)
CI01000013_02859975_02863496 TMEM170A coding upstream 248667 2859975 ~ 2863946 (+)
CI01000013_02815238_02816664 NA coding upstream 295290 2815180 ~ 2817323 (+)
CI01000013_02709871_02711692 NA coding upstream 400114 2709453 ~ 2712499 (+)
CI01000013_03121085_03147061 EDC4 coding downstream 8018 3121085 ~ 3147622 (+)
CI01000013_03186643_03190449 NRN1LA coding downstream 73576 3186643 ~ 3190677 (+)
CI01000013_03225714_03236717 FAN1 coding downstream 112647 3225714 ~ 3237045 (+)
CI01000013_03241607_03258684 MBTPS1 coding downstream 128540 3241607 ~ 3259203 (+)
CI01000013_03262979_03269729 SLC38A8A coding downstream 149912 3262979 ~ 3269882 (+)
G79601 NA non-coding upstream 65081 3047236 ~ 3047532 (+)
G79600 NA non-coding upstream 98860 3013211 ~ 3013753 (+)
G79598 NA non-coding upstream 100545 3011662 ~ 3012068 (+)
G79596 NA non-coding upstream 106343 3005981 ~ 3006270 (+)
G79593 NA non-coding upstream 115218 2996552 ~ 2997395 (+)
G79503 NA non-coding downstream 79287 3192354 ~ 3194808 (+)
G79639 NA non-coding downstream 88844 3201911 ~ 3202313 (+)
G79909 NA non-coding downstream 252475 3365542 ~ 3365893 (+)
G79976 NA non-coding downstream 260861 3373928 ~ 3374243 (+)
G79994 NA non-coding downstream 276878 3389945 ~ 3390326 (+)
G79309 NA other upstream 645442 2466765 ~ 2467171 (+)
G77695 NA other upstream 2159644 946521 ~ 952969 (+)
G77533 NA other upstream 2403064 708833 ~ 709549 (+)
G80062 NA other downstream 470941 3584008 ~ 3584784 (+)
CI01000013_04051081_04064651 NA other downstream 951866 4050837 ~ 4065829 (+)
G80845 NA other downstream 1722011 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 2943231 6049864 ~ 6060269 (+)
CI01000013_06076169_06080164 NA other downstream 2965495 6075400 ~ 6081684 (+)

Expression


Co-expression Network