G79503


Basic Information

Item Value
gene id G79503
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 3192354 ~ 3194808 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU90549
AGACCTTTTTGAAGGATATTGGTTTACTTGTGACCTTTTTGTCACTTGAGCTTAACTGAGACTTGAGAGTTTGTAGACATTTAAAAGGTTGTTGTGTCGACCTTGATTTATTGCAATGTTGAAAATAAACTTGATTTCTCATCTTACAAATCAATTGTTTCTTATTTTCACCGGCATGTCTCTCAGGTGTTGCGGACTAGTGGAACTCTGAGCCTACATTCAGCATGAGTAAAATACTTAAGTACTGTTAAAATCAGATACTCTAAGACTTTTACTCAAGTCGTATTGGCACTGGTTACTTGTAACTTGTAGTCGAGTCATTTTCGATGTAAGGTATCTGTACTTTTACTCAAGTATGGTTTTCAGGTACTCTTTACACCTCTGACTATAACAACTTTCAACACACAAATGTATCTAATACGATAAAACAGCACTTCTTTACCCCACATACGCTTGACCGGAAGAAGCGGAAGCAGCGACTGCAGCATAATAAAAGTTCCGCTGCTCTCGATCCGTGTGTCGCGCTCGTCTCTAATTAGCAATCGCTCCAGCGGCCTAATTTCTGCTCGACAGCACTCGGCCCTGCTCTGCTTCATACTACTGTAACATTCATAATCTAATCCATAAACATGATTTCTGGCCTAGTCCCATCCCGGTTCTTTTCCACCGGCTGTGAGGTGAAGACAACACCTCCCATGATTCCGTGAAATCAAGGCGTCATTAAACTACGCCTTTGTTTTGAATAAGCGACCTCTAGTGGCGAAAATTTACATATTGTGCCTTTAAGTTATTTACGTTCATTATTATTGTAATGTTATGTTCTATGTAATTTTACGCCGTCTTTCATGACGCTTTGCAGACTCTGCTTCGGCAGTGCGCGTTCATGTGTTTTGGAAGAGGCGTGGCTTTGGAGCGCGCTCTGAAGGAAGGGGGGTGGGATCTTATGCTTTCAAAGCTAGCTTGCTAGTGCTAGCCTTTCCGAAATTGCCTACCCTAGCTTTAAAATAGCAAACTTAATTTTAAGCACAATCATGGCACAATTCAAATGTCCATAGGAGGACCAAAATGCACCTCAAATGACTCCAGGCCTGATGAGGACAAATCGAAGATGCCGAAAGACATTTCCAAATATTCGAACCCCTTCATCTAGGAGGAAATTAAATGAAGGTATACTGAAATCACATTGATGAGCAATGAGTATGAAAGTAATGTAAAGAGCCCTCAAAAATGTTATTTCACCCTGTAGTGTAATCCTCTTTTGTAGGATCCTGAGAGGATTAAGTTTAAGGATTACACCTAATAAAAGTTAATCTAAGCAACACGGCTCACCTAAAGGCTTTGCCTGGGAACAGACTTGTCAGACTTTGTTGTCTGTAGTCTGAATGCCTTTGGGTGACGGTTTAAACCCAAATAATTATTGACAGGTTCATTGATTCAGTTTACCAAATAGCACAGCATTACGCTTCAAGGTGTTTTTGTACTAGTCTGTATCTGTATGGAACTGCTGTTCATTTGATGTTGGTCAGAGTAATGTGTATATATTGTATAGTCTTACATTACACATTCCTCATAGCTACTTTTTTATTTTTTCAGATATATGTATTTGTAATGACACACAAAATGATGGATTAGCTTAAAAAAATCACTTCATGATGGAAATATATTGTAAATATGACCGATATGCTGTAAAGAAGAGCTTATTTGAATGAGTATATTATATGAAACACATTATCATTAAGTGCATAATTAACAGATGAGGCAAATCAATGGAGGTGAACATATTAACATCAATTAGATCAAATAGTGTATGATTATCACCATAAATATGAGCATACAGTGTATTTCTGTGGATACATGACTTTGTGTGTAAAGCAAGGGAGGTTTTTCCCCAGATCAGCTTTCATTACCTCCATTCAACACTGTGCTCTGCTCCGCTCAGCGGATTCTTCAGTCAATGTGATTTATGTTTAATTTTTAGGCTTAATTGGCAATCAATCATGTTTGCCAATGCAGTGAACTTATTAAGGAGGGCAAAAGCCATTTATTTAGTCTGAAAAAAAAATTAATAGGGGAGGACTGCCACTTATGCCTCAAATTTTGCTTTTATGTAGTAAACTGACTATCAACACATGCTTTTCTTTGTTATAAGTCAAATTCCACTATTGTCATAACCAGTCAATGTAGTACAATCTAATGAATATATGTCTAAATAATATAGTAAGGGCTAATATGTACAGATTTTATGTGTACATCACTCCTTGCTACATAGTTTTCATTAATGCCTCCCTTATTTATAATCTTTGGCCATTATATATACAATATTTGGAGGCTGTTATAATTTGCTTGGCAGATGAATTTTATGAATCGCATGTTAAAAAAAAAAAAGAGTGTTTTCTCCTTTTATTTTGAAATCTTATTATATATTGCTGATCGCTCACTCATTTTAAGCTGTGCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU90549 True 2455 lncRNA 0.37 1 3192354 3194808

Neighbor

gene id symbol gene type direction distance location
CI01000013_03186643_03190449 NRN1LA coding upstream 1677 3186643 ~ 3190677 (+)
CI01000013_03121085_03147061 EDC4 coding upstream 44732 3121085 ~ 3147622 (+)
CI01000013_03087239_03094115 TSNAXIP1 coding upstream 97896 3087239 ~ 3094458 (+)
CI01000013_03019688_03044233 TSNAXIP1, PARD6A coding upstream 147980 3019688 ~ 3044374 (+)
CI01000013_02859975_02863496 TMEM170A coding upstream 328408 2859975 ~ 2863946 (+)
CI01000013_03225714_03236717 FAN1 coding downstream 30906 3225714 ~ 3237045 (+)
CI01000013_03241607_03258684 MBTPS1 coding downstream 46799 3241607 ~ 3259203 (+)
CI01000013_03262979_03269729 SLC38A8A coding downstream 68171 3262979 ~ 3269882 (+)
CI01000013_03457529_03463949 PNP6 coding downstream 262721 3457529 ~ 3465011 (+)
CI01000013_03477151_03488842 CALB2, CALB2A coding downstream 282232 3477040 ~ 3489333 (+)
G79625 NA non-coding upstream 79287 3112613 ~ 3113067 (+)
G79601 NA non-coding upstream 144822 3047236 ~ 3047532 (+)
G79600 NA non-coding upstream 178601 3013211 ~ 3013753 (+)
G79598 NA non-coding upstream 180286 3011662 ~ 3012068 (+)
G79596 NA non-coding upstream 186084 3005981 ~ 3006270 (+)
G79639 NA non-coding downstream 7103 3201911 ~ 3202313 (+)
G79909 NA non-coding downstream 170734 3365542 ~ 3365893 (+)
G79976 NA non-coding downstream 179120 3373928 ~ 3374243 (+)
G79994 NA non-coding downstream 195137 3389945 ~ 3390326 (+)
G80003 NA non-coding downstream 216687 3411495 ~ 3412005 (+)
G79309 NA other upstream 725183 2466765 ~ 2467171 (+)
G77695 NA other upstream 2239385 946521 ~ 952969 (+)
G77533 NA other upstream 2482805 708833 ~ 709549 (+)
G80062 NA other downstream 389200 3584008 ~ 3584784 (+)
CI01000013_04051081_04064651 NA other downstream 870125 4050837 ~ 4065829 (+)
G80845 NA other downstream 1640270 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 2861490 6049864 ~ 6060269 (+)
CI01000013_06076169_06080164 NA other downstream 2883754 6075400 ~ 6081684 (+)

Expression


Co-expression Network