G79909


Basic Information

Item Value
gene id G79909
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 3365542 ~ 3365893 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU90988
GCATAAACAACATCTGCAAAGTTACGATGCTCAAAGTTCAATCGTCAAATTGGCTGCGTTAGATTCTCCAGCTTTGTTGTTGTTGAGTATCCAAAGCACATGCTGTTAAAGCTCTGCCCTCTTCTGGAAAGGGGGCTGGAAGCAGCAGCTCATTTGCATTTAAAGGGACACACACAAAAATGGCGTGTTTTTGCTCACACCCAAATAGTGGTAAATTTGACACGCTATAATAAATGATCTGTGGGGTATTTTGAGCTGAAACTTCACAGACACATTCTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU90988 True 280 lncRNA 0.42 2 3365542 3365893

Neighbor

gene id symbol gene type direction distance location
CI01000013_03262979_03269729 SLC38A8A coding upstream 95660 3262979 ~ 3269882 (+)
CI01000013_03241607_03258684 MBTPS1 coding upstream 106339 3241607 ~ 3259203 (+)
CI01000013_03225714_03236717 FAN1 coding upstream 128497 3225714 ~ 3237045 (+)
CI01000013_03186643_03190449 NRN1LA coding upstream 174865 3186643 ~ 3190677 (+)
CI01000013_03121085_03147061 EDC4 coding upstream 217920 3121085 ~ 3147622 (+)
CI01000013_03457529_03463949 PNP6 coding downstream 91636 3457529 ~ 3465011 (+)
CI01000013_03477151_03488842 CALB2, CALB2A coding downstream 111147 3477040 ~ 3489333 (+)
CI01000013_03493064_03499971 GOT2, GOT2A, GOT2B coding downstream 127171 3493064 ~ 3500131 (+)
CI01000013_03501267_03503856 NA coding downstream 135374 3501267 ~ 3504388 (+)
CI01000013_03505522_03510594 NA coding downstream 139629 3505522 ~ 3510717 (+)
G79639 NA non-coding upstream 163229 3201911 ~ 3202313 (+)
G79503 NA non-coding upstream 170734 3192354 ~ 3194808 (+)
G79625 NA non-coding upstream 252475 3112613 ~ 3113067 (+)
G79601 NA non-coding upstream 318010 3047236 ~ 3047532 (+)
G79600 NA non-coding upstream 351789 3013211 ~ 3013753 (+)
G79976 NA non-coding downstream 8035 3373928 ~ 3374243 (+)
G79994 NA non-coding downstream 24052 3389945 ~ 3390326 (+)
G80003 NA non-coding downstream 45602 3411495 ~ 3412005 (+)
G80058 NA non-coding downstream 164542 3530435 ~ 3530847 (+)
G80041 NA non-coding downstream 236470 3602363 ~ 3652575 (+)
G79309 NA other upstream 898371 2466765 ~ 2467171 (+)
G77695 NA other upstream 2412573 946521 ~ 952969 (+)
G77533 NA other upstream 2655993 708833 ~ 709549 (+)
G80062 NA other downstream 218115 3584008 ~ 3584784 (+)
CI01000013_04051081_04064651 NA other downstream 699040 4050837 ~ 4065829 (+)
G80845 NA other downstream 1469185 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 2690405 6049864 ~ 6060269 (+)
CI01000013_06076169_06080164 NA other downstream 2712669 6075400 ~ 6081684 (+)

Expression


Co-expression Network