G80068


Basic Information

Item Value
gene id G80068
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 3712976 ~ 3713187 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU91161
TCAAAAGGGTGCTTCTACTAAATACTGAGCAAAGGGTCTGAATACTTAGGACCATGTGATATTTCAGTTTTTCTTTTTTAATAAATCTGCAAAAATGTCAACAATTCTGTGTTTTTCTGTCAATATGGGGTGCTGTGTGTACATTAATGAGGGAAAAAAATGAACTTAAATGATTTTAGCAAATAGCTGCAATATAACAAAGAGTGAAAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU91161 True 212 lncRNA 0.31 1 3712976 3713187

Neighbor

gene id symbol gene type direction distance location
CI01000013_03617490_03705093 IGF1R, IGF1RA coding upstream 7883 3617490 ~ 3705093 (+)
CI01000013_03570185_03581155 NA coding upstream 131247 3570089 ~ 3581729 (+)
CI01000013_03565240_03566364 NA coding upstream 146425 3565136 ~ 3566551 (+)
CI01000013_03505522_03510594 NA coding upstream 202259 3505522 ~ 3510717 (+)
CI01000013_03501267_03503856 NA coding upstream 208588 3501267 ~ 3504388 (+)
CI01000013_03715150_03721616 SYNM coding downstream 1963 3715150 ~ 3721731 (+)
CI01000013_03744519_03787129 CTTNBP2 coding downstream 31332 3744519 ~ 3788177 (+)
CI01000013_03823326_03839656 ASZ1 coding downstream 110139 3823326 ~ 3839910 (+)
CI01000013_03843207_03852634 WNT2 coding downstream 130020 3843207 ~ 3854025 (+)
CI01000013_03856173_03872356 BCL2L13 coding downstream 142986 3856173 ~ 3872947 (+)
G80037 NA non-coding upstream 885 3708957 ~ 3712091 (+)
G80040 NA non-coding upstream 4748 3706723 ~ 3708228 (+)
G80041 NA non-coding upstream 60401 3602363 ~ 3652575 (+)
G80058 NA non-coding upstream 182129 3530435 ~ 3530847 (+)
G80003 NA non-coding upstream 300971 3411495 ~ 3412005 (+)
G80069 NA non-coding downstream 110 3713297 ~ 3713517 (+)
G80072 NA non-coding downstream 18956 3732143 ~ 3740009 (+)
G80075 NA non-coding downstream 27089 3740276 ~ 3740559 (+)
G80081 NA non-coding downstream 79480 3792667 ~ 3792881 (+)
G80083 NA non-coding downstream 79817 3793004 ~ 3793400 (+)
G80062 NA other upstream 128192 3584008 ~ 3584784 (+)
G79309 NA other upstream 1245805 2466765 ~ 2467171 (+)
G77695 NA other upstream 2760007 946521 ~ 952969 (+)
G77533 NA other upstream 3003427 708833 ~ 709549 (+)
CI01000013_04051081_04064651 NA other downstream 351746 4050837 ~ 4065829 (+)
G80845 NA other downstream 1121891 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 2343111 6049864 ~ 6060269 (+)
CI01000013_06076169_06080164 NA other downstream 2365375 6075400 ~ 6081684 (+)
G81994 NA other downstream 3622758 7335945 ~ 7338239 (+)

Expression


Co-expression Network