G80143


Basic Information

Item Value
gene id G80143
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 3927170 ~ 3927724 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU91247
GTCCTTGATTATGATTTCACTTTTGTAACTGTAGTTAGTGTGTAATGTTGCTGTTTGAGCATAAACAACATCTGCAAAGTTACGACGCTCAAAGTTCAATGCAAAGGGAGATATTTTCTTTTATAGAAATCGCTTTTTAAGGACTACAATGAGCTTCTTCCTGGGTTGGTGACATCACTTACTCTAAAATTTACACAAACCCTGTCCCCGAGAATATGCAACAAAGGGGGTGAGGCCATGTTGGGCTACTTTAGAGAAGAGGAAGAGTTGCTGTAGTAGAGTGTTGTTGCCATGCTGTCATTTTACACCGGACTGCTTCACAAACGAGGGTGAATTCGACGCTGGATTTGCACAAAAGATTAACATGACGGCACATGCTAGTCGATGAGTTGAATCAACTCCACAGCAACTACACAAATTTATCCACTAACCATTCAGAAATGCCCAGTTGCGTTCTAAACGTTGTAACTTCTTCCTGAGTCTCTCCAACAGTGTCCGACTCCGGTTTGAACAATGTAAGGCTGAACACTGTTACTGACAATTGTCATTTTGGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU91247 True 555 lncRNA 0.41 1 3927170 3927724

Neighbor

gene id symbol gene type direction distance location
CI01000013_03902606_03908849 IGHMBP2 coding upstream 18112 3902606 ~ 3909058 (+)
CI01000013_03885988_03895027 KIAA1147 coding upstream 32143 3885988 ~ 3895027 (+)
CI01000013_03856173_03872356 BCL2L13 coding upstream 54223 3856173 ~ 3872947 (+)
CI01000013_03843207_03852634 WNT2 coding upstream 73145 3843207 ~ 3854025 (+)
CI01000013_03823326_03839656 ASZ1 coding upstream 87260 3823326 ~ 3839910 (+)
CI01000013_03937929_03938255 FAM180B coding downstream 10205 3937929 ~ 3938261 (+)
CI01000013_03949848_03950925 NA coding downstream 22124 3949848 ~ 3951293 (+)
CI01000013_03952621_03964132 KIF23 coding downstream 24897 3952621 ~ 3964234 (+)
CI01000013_04051081_04064651 NA coding downstream 123113 4050837 ~ 4065829 (+)
CI01000013_04084679_04088148 NA coding downstream 156090 4083814 ~ 4090171 (+)
G80088 NA non-coding upstream 120455 3806054 ~ 3806715 (+)
G80087 NA non-coding upstream 121700 3805215 ~ 3805470 (+)
G80083 NA non-coding upstream 133770 3793004 ~ 3793400 (+)
G80081 NA non-coding upstream 134289 3792667 ~ 3792881 (+)
G80075 NA non-coding upstream 186611 3740276 ~ 3740559 (+)
G80144 NA non-coding downstream 598 3928322 ~ 3928550 (+)
G80105 NA non-coding downstream 19080 3946804 ~ 3948697 (+)
G80153 NA non-coding downstream 82591 4010315 ~ 4010552 (+)
G80168 NA non-coding downstream 128109 4055833 ~ 4056059 (+)
G80062 NA other upstream 342386 3584008 ~ 3584784 (+)
G79309 NA other upstream 1459999 2466765 ~ 2467171 (+)
G77695 NA other upstream 2974201 946521 ~ 952969 (+)
G77533 NA other upstream 3217621 708833 ~ 709549 (+)
G80845 NA other downstream 907354 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 2128574 6049864 ~ 6060269 (+)
CI01000013_06076169_06080164 NA other downstream 2150838 6075400 ~ 6081684 (+)
G81994 NA other downstream 3408221 7335945 ~ 7338239 (+)

Expression


Co-expression Network