G80174


Basic Information

Item Value
gene id G80174
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 4062088 ~ 4062358 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU91280
GAAATATACATTAATCATAAACTCCAACTTGGATTTGAGCATTTAAGTTTATCGAGTCATTTTACTGACCCATAAGCAAAGCGTGTCCATTACCAGGGGCTGTAATTGCAATCCTGGCAGGAGGACACAAAACAAAAAGCAGTTGTATTAAGTTGTTGACACCGCAGTTTAATTGCCAAGCCACTGAAAGGGAATATCTAAATGCAGTATGGCTCAATTAGAAGAATAAATGCATTAGTTACTGGGAAACAGCCTCGGGACACAGATACCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU91280 True 271 lncRNA 0.39 1 4062088 4062358

Neighbor

gene id symbol gene type direction distance location
CI01000013_03952621_03964132 KIF23 coding upstream 97854 3952621 ~ 3964234 (+)
CI01000013_03949848_03950925 NA coding upstream 110795 3949848 ~ 3951293 (+)
CI01000013_03937929_03938255 FAM180B coding upstream 123827 3937929 ~ 3938261 (+)
CI01000013_03902606_03908849 IGHMBP2 coding upstream 153030 3902606 ~ 3909058 (+)
CI01000013_03885988_03895027 KIAA1147 coding upstream 167061 3885988 ~ 3895027 (+)
CI01000013_04084679_04088148 NA coding downstream 21456 4083814 ~ 4090171 (+)
CI01000013_04316134_04317091 NA coding downstream 253776 4316134 ~ 4317198 (+)
CI01000013_04344339_04347938 AAGAB coding downstream 281981 4344339 ~ 4348083 (+)
CI01000013_04425884_04426805 NA coding downstream 363390 4425748 ~ 4427010 (+)
CI01000013_04505188_04527744 NA coding downstream 442787 4505145 ~ 4527872 (+)
CI01000013_04051081_04064651 NA non-coding upstream 57 4050837 ~ 4065829 (+)
G80168 NA non-coding upstream 6029 4055833 ~ 4056059 (+)
G80153 NA non-coding upstream 51536 4010315 ~ 4010552 (+)
G80105 NA non-coding upstream 113391 3946804 ~ 3948697 (+)
G80175 NA non-coding downstream 10204 4072562 ~ 4078376 (+)
G80493 NA non-coding downstream 53801 4116159 ~ 4116382 (+)
G80505 NA non-coding downstream 64556 4126914 ~ 4127129 (+)
G80518 NA non-coding downstream 121314 4183672 ~ 4183892 (+)
G80062 NA other upstream 477304 3584008 ~ 3584784 (+)
G79309 NA other upstream 1594917 2466765 ~ 2467171 (+)
G77695 NA other upstream 3109119 946521 ~ 952969 (+)
G77533 NA other upstream 3352539 708833 ~ 709549 (+)
G80845 NA other downstream 772720 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 1993940 6049864 ~ 6060269 (+)
CI01000013_06076169_06080164 NA other downstream 2016204 6075400 ~ 6081684 (+)
G81994 NA other downstream 3273587 7335945 ~ 7338239 (+)

Expression


Co-expression Network