G80175


Basic Information

Item Value
gene id G80175
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 4072562 ~ 4078376 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU91281
TTTTAAGCTTGAAAGCCCATTTATTGTTTATGCACAGAAAAAAACATTCTTCAAAATTTATCCATGGCATTTTACAAGTTTGGAACAATAAGGGTGAGAAAATGATGACCGTTTAGATTTTTGTGGAATGTAATATTCCTTTAACTTGACTAGATCAATGTATACTGCAAAAACAACCATGCAACCACAGAAGAATGATTTGTGCCCTGCACCTTCATTTAACCGAAAGGATGAAGCAATCAGACGGCAGGCAGTCAGGTAGCCTGAGAGCCCAGTCAATGTAACGCTCATTTCACACCCAGTCACACACACTACATCACCTCATGCACTCCCTCCACTTTCAGGTTGGGGACTTTGGGTGACAGAGAGAGAGAGAGATTGAAATCGAGCAAGAAAATAAAAAGAAATGAGAGGAAGAAATTGGAAGAGAAAGGTAAGGTGGGGAACGGGCCAACTTTGGAGTAGGGGTGGGAATCCTCAGAATTTGATTTGATTTTGTTTCAGGGAGTCACAATCTGATTGCAAAATAATTCTCAATACATCTCAATTTTTCAGCAGCAGCACAAATCTTTGGGGAGTTAAGGTGGCCTATTGCCAAATTCTGTGTAAATATCATGTATAAAACATAGGCCTGCTCTGACACACCAATAAAACAGAATAAGCAGATACACTAACTCTTGTTCAGCTTTCATTTGTATACATATGGCAATTCTGCATTAGAGAAACCTTAAATTTTATTTAATTTTATCATTTTTTTCCCTGCACCTCTACTTTGAAGGCTTTTATTCACATACATACCATGGGCGAGCGTCCATAGGCAGCAGCAGCGGCCGCACTCATCTGAGGAGAGATGTGAAGGCCGGCATAGACTCCAGGGCTGGTCAGAGAACCATTCATCTCATGGTGGCTCATCATGGCAAAGGGAGTTGGGTAAGAGAGGGGGGTGCGCAGAGCAGGGGCGGTTAGAACTTCCATCGGAGGCTTGCCCAGGATTGGCCGCAACCCAGGGGTGGTGCTGGTACCCGGGGTGGGGGCATCGTTACGAGGCGTGGGGGTGTTGGACTTGAGACCGGGAGTTGAGGATTTGTCATTATGGCCATGCTCCTTGTTTTTAGAAGAGGGGGTGCTGCCGGAAGAGGCCACAGAGGCGGGGCTGTTGGGCGTATCCTTCTTTGCTGGGCGGGGCTTATCTATGCCATTCTCAGGAGGGGAGTGGGCAGGGCTTCCTCTGGGCGTGGCAGGGTCCTCGTTGGATACATCAACCACCAGATCATCACTTTTGTCTCCGTCACTGTCATATCGGCTCATGCTGTCCTTGTCCTCCACTTTGCGTTTCTTGGAGTCCAAGCTGTAATCGGAGGAGCCACGGTGTTTCTCGCTGGTTGTGCGCAGACTGTCTGATGGAGAGATGGAGTTGTTTGTGCTCTCTCGGTGCTCCAGGTCATGGTGGTTTTTTTCATCCTTCACTGGCAAGTGTGGCTGACTTCCCAGGGCTCCCAGAGCCAGCAGGCCCGAGCCAGAGCCGGTGACTGGTGGAATTCCTGGTGGCTGAAGGCCAGAAGGGTGGGGAGGTAAAGCCACAGGTCCGTGGGCAGCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU91281 True 1598 lncRNA 0.48 7 4072562 4078376

Neighbor

gene id symbol gene type direction distance location
CI01000013_04051081_04064651 NA coding upstream 7393 4050837 ~ 4065829 (+)
CI01000013_03952621_03964132 KIF23 coding upstream 108328 3952621 ~ 3964234 (+)
CI01000013_03949848_03950925 NA coding upstream 121269 3949848 ~ 3951293 (+)
CI01000013_03937929_03938255 FAM180B coding upstream 134301 3937929 ~ 3938261 (+)
CI01000013_03902606_03908849 IGHMBP2 coding upstream 163504 3902606 ~ 3909058 (+)
CI01000013_04084679_04088148 NA coding downstream 5438 4083814 ~ 4090171 (+)
CI01000013_04316134_04317091 NA coding downstream 237758 4316134 ~ 4317198 (+)
CI01000013_04344339_04347938 AAGAB coding downstream 265963 4344339 ~ 4348083 (+)
CI01000013_04425884_04426805 NA coding downstream 347372 4425748 ~ 4427010 (+)
CI01000013_04505188_04527744 NA coding downstream 426769 4505145 ~ 4527872 (+)
G80174 NA non-coding upstream 10204 4062088 ~ 4062358 (+)
G80168 NA non-coding upstream 16503 4055833 ~ 4056059 (+)
G80153 NA non-coding upstream 62010 4010315 ~ 4010552 (+)
G80493 NA non-coding downstream 37783 4116159 ~ 4116382 (+)
G80505 NA non-coding downstream 48538 4126914 ~ 4127129 (+)
G80518 NA non-coding downstream 105296 4183672 ~ 4183892 (+)
G80506 NA non-coding downstream 127761 4206137 ~ 4206711 (+)
G80062 NA other upstream 487778 3584008 ~ 3584784 (+)
G79309 NA other upstream 1605391 2466765 ~ 2467171 (+)
G77695 NA other upstream 3119593 946521 ~ 952969 (+)
G77533 NA other upstream 3363013 708833 ~ 709549 (+)
G80845 NA other downstream 756702 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 1977922 6049864 ~ 6060269 (+)
CI01000013_06076169_06080164 NA other downstream 2000186 6075400 ~ 6081684 (+)
G81994 NA other downstream 3257569 7335945 ~ 7338239 (+)
G82168 NA other downstream 3949962 8028338 ~ 8041343 (+)

Expression


Co-expression Network