G80518


Basic Information

Item Value
gene id G80518
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 4183672 ~ 4183892 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU91656
CAGCAATAACACTCCCTTTTTCAATGCCCAGAAAGCTGCTAAAAACATATTTAAAACAGTTCATGTGACTACAGTGGTTCAACTTTAATATTATAAAGCGATGAGAATACTTTTTGTGCGCCAAAAATAACAAAATAGCGACTTTATTCCACAATATCTAGTGATGGGCGATTTCAAAACACTGCTTCATGAAGCTTATGAATCATTTGTTTCGAATCAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU91656 True 221 lncRNA 0.34 1 4183672 4183892

Neighbor

gene id symbol gene type direction distance location
CI01000013_04084679_04088148 NA coding upstream 94050 4083814 ~ 4090171 (+)
CI01000013_04051081_04064651 NA coding upstream 118503 4050837 ~ 4065829 (+)
CI01000013_03952621_03964132 KIF23 coding upstream 219438 3952621 ~ 3964234 (+)
CI01000013_03949848_03950925 NA coding upstream 232379 3949848 ~ 3951293 (+)
CI01000013_03937929_03938255 FAM180B coding upstream 245411 3937929 ~ 3938261 (+)
CI01000013_04316134_04317091 NA coding downstream 132242 4316134 ~ 4317198 (+)
CI01000013_04344339_04347938 AAGAB coding downstream 160447 4344339 ~ 4348083 (+)
CI01000013_04425884_04426805 NA coding downstream 241856 4425748 ~ 4427010 (+)
CI01000013_04505188_04527744 NA coding downstream 321253 4505145 ~ 4527872 (+)
CI01000013_04542059_04550082 LCTLB, LCTL coding downstream 358167 4542059 ~ 4550307 (+)
G80505 NA non-coding upstream 56543 4126914 ~ 4127129 (+)
G80493 NA non-coding upstream 67290 4116159 ~ 4116382 (+)
G80175 NA non-coding upstream 105296 4072562 ~ 4078376 (+)
G80174 NA non-coding upstream 121314 4062088 ~ 4062358 (+)
G80506 NA non-coding downstream 22245 4206137 ~ 4206711 (+)
G80529 NA non-coding downstream 34756 4218648 ~ 4219031 (+)
G80512 NA non-coding downstream 39561 4223453 ~ 4224034 (+)
G80614 NA non-coding downstream 228402 4412294 ~ 4412508 (+)
G80616 NA non-coding downstream 229205 4413097 ~ 4413304 (+)
G80062 NA other upstream 598888 3584008 ~ 3584784 (+)
G79309 NA other upstream 1716501 2466765 ~ 2467171 (+)
G77695 NA other upstream 3230703 946521 ~ 952969 (+)
G77533 NA other upstream 3474123 708833 ~ 709549 (+)
G80845 NA other downstream 651186 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 1872406 6049864 ~ 6060269 (+)
CI01000013_06076169_06080164 NA other downstream 1894670 6075400 ~ 6081684 (+)
G81994 NA other downstream 3152053 7335945 ~ 7338239 (+)
G82168 NA other downstream 3844446 8028338 ~ 8041343 (+)

Expression


Co-expression Network