G80506


Basic Information

Item Value
gene id G80506
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 4206137 ~ 4206711 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU91643
GGGAAGGACAATTTATTGACTGACATGTTTCTCAAAGAAAAAAAAAAAAAGTTAAAACAATGCAGCATTTCAACTATACATGAGCAGGTTCTGTTTATCAATATTACATAAACCAAAAATATGGATCAATAAAAAGAGCAAAAACCAGCAGCTTTCCAAAGAGATTTAATCTAATTCCTTATCTGGAATACCAGACATTATCCTTAGATTACTGAACCAAATTAACCAATATCGACTGATGTTGTGAGCACTAAAATCTTCCACAAGACTGATGAATGGATTTTAAATAAAAATAAAATGAGGATCAGAACGTAGCACCAAACATCCTCACTGGCTTTGTCCTCAGACAGCTTTGCGATGATATTCTGGAGGTGCAACCTCATAGTCACTTGCACAGAACAGACATGACGAATTCTTCACCAAATACTTAAAAAATCTTGCAGGTAGCTAAGAAGCAGGGCTAGACTCTTCTCGTCTAGAGGTGTGTAAGCCAGCA
>TU91644
GGGAAGGACAATTTATTGACTGACATGTTTCTCAAAGAAAAAAAAAAAAAGTTAAAACAATGCAGCATTTCAACTATACATGAGCAGGTTCTGTTTATCAATATTACATAAACCAAAAATATGGATCAATAAAAAGAGCAAAAACCAGCAGCTTTCCAAAGAGATTTAATCTAATTCCTTATCTGGAATACCAGACATTATCCTTAGATTACTGAACCAAATTAACCAATATCGACTGATGTTGTGAGCACTAAAATCTTCCACAAGACTGATGAATGGATTTTAAATAAAAATAAAATGAGGATCAGAACGTAGCACCAAACATCCTCACTGGCTTTGTCCTCAGACAGCTTTGCGATGATATTCTGGAGGTGCAACCTCATAGTCACTTGCACAGAACAGACATGACGAATTCTTCACCAAATACCTAAAAAAAATCTTGCAGGTAGCTAAGAAGCAGGGCTAGACTCTTCTCGTCTAGAGGTGTGTAAGCCAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU91643 False 496 lncRNA 0.36 2 4206137 4206711
TU91644 True 498 lncRNA 0.36 2 4206137 4206711

Neighbor

gene id symbol gene type direction distance location
CI01000013_04084679_04088148 NA coding upstream 116515 4083814 ~ 4090171 (+)
CI01000013_04051081_04064651 NA coding upstream 140968 4050837 ~ 4065829 (+)
CI01000013_03952621_03964132 KIF23 coding upstream 241903 3952621 ~ 3964234 (+)
CI01000013_03949848_03950925 NA coding upstream 254844 3949848 ~ 3951293 (+)
CI01000013_03937929_03938255 FAM180B coding upstream 267876 3937929 ~ 3938261 (+)
CI01000013_04316134_04317091 NA coding downstream 109423 4316134 ~ 4317198 (+)
CI01000013_04344339_04347938 AAGAB coding downstream 137628 4344339 ~ 4348083 (+)
CI01000013_04425884_04426805 NA coding downstream 219037 4425748 ~ 4427010 (+)
CI01000013_04505188_04527744 NA coding downstream 298434 4505145 ~ 4527872 (+)
CI01000013_04542059_04550082 LCTLB, LCTL coding downstream 335348 4542059 ~ 4550307 (+)
G80518 NA non-coding upstream 22245 4183672 ~ 4183892 (+)
G80505 NA non-coding upstream 79008 4126914 ~ 4127129 (+)
G80493 NA non-coding upstream 89755 4116159 ~ 4116382 (+)
G80175 NA non-coding upstream 127761 4072562 ~ 4078376 (+)
G80529 NA non-coding downstream 11937 4218648 ~ 4219031 (+)
G80512 NA non-coding downstream 16742 4223453 ~ 4224034 (+)
G80614 NA non-coding downstream 205583 4412294 ~ 4412508 (+)
G80616 NA non-coding downstream 206386 4413097 ~ 4413304 (+)
G80607 NA non-coding downstream 209550 4416261 ~ 4444625 (+)
G80062 NA other upstream 621353 3584008 ~ 3584784 (+)
G79309 NA other upstream 1738966 2466765 ~ 2467171 (+)
G77695 NA other upstream 3253168 946521 ~ 952969 (+)
G77533 NA other upstream 3496588 708833 ~ 709549 (+)
G80845 NA other downstream 628367 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 1849587 6049864 ~ 6060269 (+)
CI01000013_06076169_06080164 NA other downstream 1871851 6075400 ~ 6081684 (+)
G81994 NA other downstream 3129234 7335945 ~ 7338239 (+)
G82168 NA other downstream 3821627 8028338 ~ 8041343 (+)

Expression


Co-expression Network