G80875


Basic Information

Item Value
gene id G80875
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 4718083 ~ 4718297 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU92057
AGTGGGCAATGCCTTTCATTTGTGCCACTATTAAATATTCTAATATTTAAGGTGTTTTCCTATTCTAGCTAGTGGATATCTTTTATGATGAATGATGCACTTTTTTGGACTTCAAAATCAGAAGTGCCATTCACTACCATTATAAATTTTGGAAGAGTCAGGATATTTTTTAATATAACTCTGACTGTGTTCGTCTAAAAGAAGATAGTCATATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU92057 True 215 lncRNA 0.31 1 4718083 4718297

Neighbor

gene id symbol gene type direction distance location
CI01000013_04673313_04707104 MEGF11 coding upstream 10613 4673216 ~ 4707470 (+)
CI01000013_04657029_04672057 MEGF11 coding upstream 45341 4656803 ~ 4672742 (+)
CI01000013_04612468_04618550 NA coding upstream 99083 4612054 ~ 4619000 (+)
CI01000013_04542059_04550082 LCTLB, LCTL coding upstream 167776 4542059 ~ 4550307 (+)
CI01000013_04505188_04527744 NA coding upstream 190211 4505145 ~ 4527872 (+)
CI01000013_04720501_04724747 NA coding downstream 2204 4720501 ~ 4724940 (+)
CI01000013_04750261_04754885 NA coding downstream 31964 4750261 ~ 4756045 (+)
CI01000013_04760068_04760352 NA coding downstream 41710 4760007 ~ 4760374 (+)
CI01000013_04774039_04780331 VWA9 coding downstream 55742 4774039 ~ 4780762 (+)
CI01000013_04788303_04790895 PPCDC coding downstream 70006 4788303 ~ 4791025 (+)
G80834 NA non-coding upstream 5554 4709807 ~ 4712529 (+)
G80826 NA non-coding upstream 140170 4577531 ~ 4577913 (+)
G80832 NA non-coding upstream 144751 4572802 ~ 4573332 (+)
G80831 NA non-coding upstream 145983 4571764 ~ 4572100 (+)
G80830 NA non-coding upstream 146530 4571198 ~ 4571553 (+)
G80879 NA non-coding downstream 52013 4770310 ~ 4770538 (+)
G80842 NA non-coding downstream 98173 4816470 ~ 4818947 (+)
G80850 NA non-coding downstream 108021 4826318 ~ 4828164 (+)
G80893 NA non-coding downstream 131142 4849439 ~ 4849797 (+)
G80919 NA non-coding downstream 200686 4918983 ~ 4919289 (+)
CI01000013_04051081_04064651 NA other upstream 652254 4050837 ~ 4065829 (+)
G80062 NA other upstream 1133299 3584008 ~ 3584784 (+)
G79309 NA other upstream 2250912 2466765 ~ 2467171 (+)
G77695 NA other upstream 3765114 946521 ~ 952969 (+)
G77533 NA other upstream 4008534 708833 ~ 709549 (+)
G80845 NA other downstream 116781 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 1338001 6049864 ~ 6060269 (+)
CI01000013_06076169_06080164 NA other downstream 1360265 6075400 ~ 6081684 (+)
G81994 NA other downstream 2617648 7335945 ~ 7338239 (+)
G82168 NA other downstream 3310041 8028338 ~ 8041343 (+)

Expression


Co-expression Network