G80879


Basic Information

Item Value
gene id G80879
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 4770310 ~ 4770538 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU92062
TACAAACATTCTACCAAATATCTTCCTTTGTGTACAGCAGAACAAATAAATTCATACAGGTTTGAAACATCTTGAGGGGGAGTAAATTATGACAGAATTTTCATTTTTGGGTGAACTATCCTTTTAAATACGTTATTAGTCTCTTTTAGGACAATTCTAGATTAGGTCATTTAGGAGAATTCTAAGGGTGAAATTCGGTGCTCCGAAACCCACCCCATCCCCCTCTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU92062 True 229 lncRNA 0.37 1 4770310 4770538

Neighbor

gene id symbol gene type direction distance location
CI01000013_04760068_04760352 NA coding upstream 9936 4760007 ~ 4760374 (+)
CI01000013_04750261_04754885 NA coding upstream 14265 4750261 ~ 4756045 (+)
CI01000013_04720501_04724747 NA coding upstream 45370 4720501 ~ 4724940 (+)
CI01000013_04673313_04707104 MEGF11 coding upstream 62840 4673216 ~ 4707470 (+)
CI01000013_04657029_04672057 MEGF11 coding upstream 97568 4656803 ~ 4672742 (+)
CI01000013_04774039_04780331 VWA9 coding downstream 3501 4774039 ~ 4780762 (+)
CI01000013_04788303_04790895 PPCDC coding downstream 17765 4788303 ~ 4791025 (+)
CI01000013_04805165_04810980 NA coding downstream 33941 4804479 ~ 4810980 (+)
CI01000013_04837614_04840771 NA coding downstream 67076 4837614 ~ 4841571 (+)
CI01000013_04854576_04864881 NA coding downstream 84038 4854576 ~ 4865227 (+)
G80875 NA non-coding upstream 52013 4718083 ~ 4718297 (+)
G80834 NA non-coding upstream 57781 4709807 ~ 4712529 (+)
G80826 NA non-coding upstream 192397 4577531 ~ 4577913 (+)
G80832 NA non-coding upstream 196978 4572802 ~ 4573332 (+)
G80831 NA non-coding upstream 198210 4571764 ~ 4572100 (+)
G80842 NA non-coding downstream 45932 4816470 ~ 4818947 (+)
G80850 NA non-coding downstream 55780 4826318 ~ 4828164 (+)
G80893 NA non-coding downstream 78901 4849439 ~ 4849797 (+)
G80919 NA non-coding downstream 148445 4918983 ~ 4919289 (+)
G80798 NA non-coding downstream 206711 4977249 ~ 4977687 (+)
CI01000013_04051081_04064651 NA other upstream 704481 4050837 ~ 4065829 (+)
G80062 NA other upstream 1185526 3584008 ~ 3584784 (+)
G79309 NA other upstream 2303139 2466765 ~ 2467171 (+)
G77695 NA other upstream 3817341 946521 ~ 952969 (+)
G77533 NA other upstream 4060761 708833 ~ 709549 (+)
G80845 NA other downstream 64540 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 1285760 6049864 ~ 6060269 (+)
CI01000013_06076169_06080164 NA other downstream 1308024 6075400 ~ 6081684 (+)
G81994 NA other downstream 2565407 7335945 ~ 7338239 (+)
G82168 NA other downstream 3257800 8028338 ~ 8041343 (+)

Expression


Co-expression Network