G80893


Basic Information

Item Value
gene id G80893
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 4849439 ~ 4849797 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU92076
AAAATCCTGTGTTCTTCAGCTCTGAAAGATTTTCAAATTAACTTTGAATATTATCACTTGATATTATTAAGATTATAATAGGTGCAAGCTGATGATGCCATGAACATACATCTTCATATAAAAGATAAAAAAGGAGCACCTCCTCCTCCTCCTGTCTAGTTGATTAGCCATGCCCGTCTTTTGTGATGCCTGAAGCACAATCAGATTAAGTTATGGGTCATTCTTTCATTGTGATTGGTAGATCAGGGACCAATCAGTGACCAGGCAGTACTTATATTATAAAAACATAAAATCTTATTGGTTTAAACCAAAATCCATGTGATGTCCATTCCAATGGACGCAGGGTCTGAAGGGGTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU92076 True 359 lncRNA 0.36 1 4849439 4849797

Neighbor

gene id symbol gene type direction distance location
CI01000013_04837614_04840771 NA coding upstream 7868 4837614 ~ 4841571 (+)
CI01000013_04805165_04810980 NA coding upstream 38459 4804479 ~ 4810980 (+)
CI01000013_04788303_04790895 PPCDC coding upstream 58414 4788303 ~ 4791025 (+)
CI01000013_04774039_04780331 VWA9 coding upstream 68677 4774039 ~ 4780762 (+)
CI01000013_04760068_04760352 NA coding upstream 89065 4760007 ~ 4760374 (+)
CI01000013_04854576_04864881 NA coding downstream 4779 4854576 ~ 4865227 (+)
CI01000013_04869003_04877964 AARS coding downstream 19168 4868965 ~ 4878377 (+)
CI01000013_04916607_04940299 SF3B3, SF3B3.L coding downstream 66516 4916313 ~ 4940308 (+)
CI01000013_04943413_04948991 IL34 coding downstream 93616 4943413 ~ 4949256 (+)
CI01000013_04950930_04976334 LONP2 coding downstream 101133 4950930 ~ 4976710 (+)
G80850 NA non-coding upstream 21275 4826318 ~ 4828164 (+)
G80842 NA non-coding upstream 30492 4816470 ~ 4818947 (+)
G80879 NA non-coding upstream 78901 4770310 ~ 4770538 (+)
G80875 NA non-coding upstream 131142 4718083 ~ 4718297 (+)
G80834 NA non-coding upstream 136910 4709807 ~ 4712529 (+)
G80919 NA non-coding downstream 69186 4918983 ~ 4919289 (+)
G80798 NA non-coding downstream 127452 4977249 ~ 4977687 (+)
G80795 NA non-coding downstream 128183 4977980 ~ 4978800 (+)
G80933 NA non-coding downstream 154577 5004374 ~ 5004897 (+)
G80942 NA non-coding downstream 178329 5028126 ~ 5028475 (+)
G80845 NA other upstream 13207 4835078 ~ 4836232 (+)
CI01000013_04051081_04064651 NA other upstream 783610 4050837 ~ 4065829 (+)
G80062 NA other upstream 1264655 3584008 ~ 3584784 (+)
G79309 NA other upstream 2382268 2466765 ~ 2467171 (+)
G77695 NA other upstream 3896470 946521 ~ 952969 (+)
CI01000013_06050285_06059640 NA other downstream 1206501 6049864 ~ 6060269 (+)
CI01000013_06076169_06080164 NA other downstream 1228765 6075400 ~ 6081684 (+)
G81994 NA other downstream 2486148 7335945 ~ 7338239 (+)
G82168 NA other downstream 3178541 8028338 ~ 8041343 (+)
G82581 NA other downstream 4479532 9329329 ~ 9334948 (+)

Expression


Co-expression Network