G80919


Basic Information

Item Value
gene id G80919
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 4918983 ~ 4919289 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU92102
ATGCAGAACGAATCAAATTGTTTTTAATCGCTTTTAGACAAATAACAAATACATTATAGCTTAACTACAAGTTTAAAAAAACAGCGCTACACGTTAAAATTAAATAAATTAAACATCGGACCTTAAGAAAAAATAGGCAAGACATATTTGACATCAACATGCATAATTTTTACAATCACCACCAGAATGTCCACCTTCACAATGAATTCCGTTAAACTCTGATCAATTCAACAGTTCTCTTCACGAAACGAAATTAATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU92102 True 259 lncRNA 0.30 2 4918983 4919289

Neighbor

gene id symbol gene type direction distance location
CI01000013_04869003_04877964 AARS coding upstream 40606 4868965 ~ 4878377 (+)
CI01000013_04854576_04864881 NA coding upstream 53756 4854576 ~ 4865227 (+)
CI01000013_04837614_04840771 NA coding upstream 77412 4837614 ~ 4841571 (+)
CI01000013_04805165_04810980 NA coding upstream 108003 4804479 ~ 4810980 (+)
CI01000013_04788303_04790895 PPCDC coding upstream 127958 4788303 ~ 4791025 (+)
CI01000013_04943413_04948991 IL34 coding downstream 24124 4943413 ~ 4949256 (+)
CI01000013_04950930_04976334 LONP2 coding downstream 31641 4950930 ~ 4976710 (+)
CI01000013_04989803_04992613 NA coding downstream 70245 4989534 ~ 4992888 (+)
CI01000013_05246618_05251189 NA coding downstream 325505 5244794 ~ 5251310 (+)
CI01000013_05262407_05267780 NA coding downstream 342840 5262129 ~ 5267965 (+)
G80893 NA non-coding upstream 69186 4849439 ~ 4849797 (+)
G80850 NA non-coding upstream 90819 4826318 ~ 4828164 (+)
G80842 NA non-coding upstream 100036 4816470 ~ 4818947 (+)
G80879 NA non-coding upstream 148445 4770310 ~ 4770538 (+)
G80875 NA non-coding upstream 200686 4718083 ~ 4718297 (+)
G80798 NA non-coding downstream 57960 4977249 ~ 4977687 (+)
G80795 NA non-coding downstream 58691 4977980 ~ 4978800 (+)
G80933 NA non-coding downstream 85085 5004374 ~ 5004897 (+)
G80942 NA non-coding downstream 108837 5028126 ~ 5028475 (+)
G80946 NA non-coding downstream 118295 5037584 ~ 5037832 (+)
G80845 NA other upstream 82751 4835078 ~ 4836232 (+)
CI01000013_04051081_04064651 NA other upstream 853154 4050837 ~ 4065829 (+)
G80062 NA other upstream 1334199 3584008 ~ 3584784 (+)
G79309 NA other upstream 2451812 2466765 ~ 2467171 (+)
G77695 NA other upstream 3966014 946521 ~ 952969 (+)
CI01000013_06050285_06059640 NA other downstream 1137009 6049864 ~ 6060269 (+)
CI01000013_06076169_06080164 NA other downstream 1159273 6075400 ~ 6081684 (+)
G81994 NA other downstream 2416656 7335945 ~ 7338239 (+)
G82168 NA other downstream 3109049 8028338 ~ 8041343 (+)
G82581 NA other downstream 4410040 9329329 ~ 9334948 (+)

Expression


Co-expression Network