G80798


Basic Information

Item Value
gene id G80798
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 4977249 ~ 4977687 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU91975
TAAAGGGTAGAGATTTGTGAGAAGCACTATTTTTCACACATTGTTCTCGAAACAACCTGTTTCAAAGCTAAAATGTGTATCCACACATCTAGCTAGAGGCTATTTGTAAGTTGCTCTCCCCAAAATGAATAAATGCTGTTTGAGCATCCCGACCAGCAACATTGGCTCAACCAATGACATTAGTTTGGGGTTGGACTAGGTTTGTCAACCAATGGAAGACCGTGAAATGTTGCACAAAGCTGAAAATCATTTTGCAACTTCTTTTGATGACATAAGCCACACAGAATCGACATTTCAGCATTCAATGTTGAGTGAAAATCCTCCCAGGATGTTCATTAGACCAATTTTGCGTTTGCAAACAGCGATGACCTTTTTTTTTGTGGGCGGAGCCTACCTCGTGGCAGAAAATTGACAGTTCTGCAGTAGCAGTCTATGGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU91975 True 439 lncRNA 0.41 1 4977249 4977687

Neighbor

gene id symbol gene type direction distance location
CI01000013_04950930_04976334 LONP2 coding upstream 539 4950930 ~ 4976710 (+)
CI01000013_04943413_04948991 IL34 coding upstream 27993 4943413 ~ 4949256 (+)
CI01000013_04916607_04940299 SF3B3, SF3B3.L coding upstream 36941 4916313 ~ 4940308 (+)
CI01000013_04869003_04877964 AARS coding upstream 98872 4868965 ~ 4878377 (+)
CI01000013_04854576_04864881 NA coding upstream 112022 4854576 ~ 4865227 (+)
CI01000013_04989803_04992613 NA coding downstream 11847 4989534 ~ 4992888 (+)
CI01000013_05246618_05251189 NA coding downstream 267107 5244794 ~ 5251310 (+)
CI01000013_05262407_05267780 NA coding downstream 284442 5262129 ~ 5267965 (+)
CI01000013_05402289_05403494 NA coding downstream 423900 5401587 ~ 5403927 (+)
CI01000013_05436977_05445492 NA coding downstream 459290 5436977 ~ 5445492 (+)
G80919 NA non-coding upstream 57960 4918983 ~ 4919289 (+)
G80893 NA non-coding upstream 127452 4849439 ~ 4849797 (+)
G80850 NA non-coding upstream 149085 4826318 ~ 4828164 (+)
G80842 NA non-coding upstream 158302 4816470 ~ 4818947 (+)
G80879 NA non-coding upstream 206711 4770310 ~ 4770538 (+)
G80795 NA non-coding downstream 293 4977980 ~ 4978800 (+)
G80933 NA non-coding downstream 26687 5004374 ~ 5004897 (+)
G80942 NA non-coding downstream 50439 5028126 ~ 5028475 (+)
G80946 NA non-coding downstream 59897 5037584 ~ 5037832 (+)
G81152 NA non-coding downstream 133150 5110837 ~ 5111052 (+)
G80845 NA other upstream 141017 4835078 ~ 4836232 (+)
CI01000013_04051081_04064651 NA other upstream 911420 4050837 ~ 4065829 (+)
G80062 NA other upstream 1392465 3584008 ~ 3584784 (+)
G79309 NA other upstream 2510078 2466765 ~ 2467171 (+)
G77695 NA other upstream 4024280 946521 ~ 952969 (+)
CI01000013_06050285_06059640 NA other downstream 1078611 6049864 ~ 6060269 (+)
CI01000013_06076169_06080164 NA other downstream 1100875 6075400 ~ 6081684 (+)
G81994 NA other downstream 2358258 7335945 ~ 7338239 (+)
G82168 NA other downstream 3050651 8028338 ~ 8041343 (+)
G82581 NA other downstream 4351642 9329329 ~ 9334948 (+)

Expression


Co-expression Network