Gene
RNA
| Item | Value |
|---|---|
| gene id | G296980 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NW_019172828.1 |
| NCBI id | APWO02000046.1 |
| chromosome length | 5964967 |
| location | 2209670 ~ 2209879 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| id | name | namespace |
|---|---|---|
| GO:0021532 | neural tube patterning | biological_process |
| GO:0021903 | rostrocaudal neural tube patterning | biological_process |
| GO:0030917 | midbrain-hindbrain boundary development | biological_process |
| GO:0009790 | embryo development | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU408367 | True | 210 | lncRNA | 0.47 | 1 | 2209670 | 2209879 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC111191055 | NA | coding | downstream | 648270 | 1553406 ~ 1561400 (-) |
| LOC103045206 | LOC108413642 | coding | downstream | 663733 | 1497029 ~ 1545937 (-) |
| LOC103044891 | fam171a2 | coding | downstream | 715797 | 1393162 ~ 1493873 (-) |
| LOC103043375 | tcap,LOC108413611 | coding | downstream | 847749 | 1359317 ~ 1361921 (-) |
| LOC103043996 | LOC108413591 | coding | downstream | 948682 | 1229707 ~ 1260988 (-) |
| LOC111191030 | NA | coding | upstream | 67487 | 2277366 ~ 2281361 (-) |
| trnat-cgu_5 | NA | coding | upstream | 71100 | 2280979 ~ 2281051 (-) |
| trnar-ucg_44 | NA | coding | upstream | 71261 | 2281140 ~ 2281212 (-) |
| trnac-aca_6 | NA | coding | upstream | 71625 | 2281504 ~ 2281576 (-) |
| trnac-aca_7 | NA | coding | upstream | 71727 | 2281606 ~ 2281678 (-) |
| G296978 | NA | non-coding | downstream | 9280 | 2200179 ~ 2200390 (-) |
| G296974 | NA | non-coding | downstream | 57523 | 2151918 ~ 2152147 (-) |
| G296972 | NA | non-coding | downstream | 70750 | 2138713 ~ 2138920 (-) |
| G296970 | NA | non-coding | downstream | 75245 | 2122421 ~ 2134425 (-) |
| G296967 | NA | non-coding | downstream | 187513 | 2021777 ~ 2022157 (-) |
| G296987 | NA | non-coding | upstream | 17767 | 2227646 ~ 2228204 (-) |
| G296998 | NA | non-coding | upstream | 272678 | 2482557 ~ 2482860 (-) |
| G297007 | NA | non-coding | upstream | 285238 | 2495117 ~ 2495708 (-) |
| G297009 | NA | non-coding | upstream | 295957 | 2505836 ~ 2506158 (-) |
| G297032 | NA | non-coding | upstream | 439533 | 2649412 ~ 2659222 (-) |
| LOC111191047 | NA | other | downstream | 351848 | 1845913 ~ 1857822 (-) |
| LOC107197178 | syngr1a,LOC108413620,LOC107582870,LOC107694963,LOC107727456,LOC107684634,LOC107725053,LOC107590782 | other | downstream | 820961 | 1371515 ~ 1388709 (-) |
| LOC103037146 | NA | other | upstream | 287336 | 2497215 ~ 2531502 (-) |
| G297195 | kpna2,LOC108432045,LOC108261381 | other | upstream | 1014328 | 3224207 ~ 3227171 (-) |
| G297334 | farsa,LOC106601350 | other | upstream | 1386608 | 3596487 ~ 3610695 (-) |
| elof1 | elof1,LOC101167459 | other | upstream | 2142736 | 4352615 ~ 4355768 (-) |
| G297720 | NA | other | upstream | 2155698 | 4365577 ~ 4366130 (-) |
