G296998


Basic Information

Item Value
gene id G296998
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172828.1
NCBI id APWO02000046.1
chromosome length 5964967
location 2482557 ~ 2482860 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU408385
tctctctctctcgtgtataaatactctctctcttcagctcagctcagctcagtgtgGAGATGCTGAGATGCTCCTGAGCTCAGTTATAGAGAACTGAATTAACGCTGTTTCTGTTGTATTTAGACTGTAATAATCCGGATTGTTTGGTTTCGGTATCAGTGTGAGGAACAGTGTTTCAGGTCAGgatggagaaaaaagagaagaaatctCCTAAACAGTACGGATCTGTGGAGCGAACCGAACCCGTCGAGCCCGCAGCTGCAGCAGGTGAGCGGAGCAGGTGAAGTCCTGTAGCTTAAGTTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU408385 True 304 lncRNA 0.47 1 2482557 2482860

Neighbor

gene id symbol gene type direction distance location
trnas-gcu_70 NA coding downstream 186030 2296446 ~ 2296527 (-)
trnas-gcu_69 NA coding downstream 186249 2296227 ~ 2296308 (-)
trnas-gcu_68 NA coding downstream 186468 2296008 ~ 2296089 (-)
trnas-gcu_67 NA coding downstream 186687 2295789 ~ 2295870 (-)
trnas-gcu_66 NA coding downstream 186906 2295571 ~ 2295651 (-)
mfsd6l NA coding upstream 6977 2489837 ~ 2493775 (-)
LOC111191031 NA coding upstream 460990 2943850 ~ 2945114 (-)
LOC103026382 LOC108432046,LOC107719342,LOC107602308,LOC107672125,LOC107672690 coding upstream 563370 3046230 ~ 3060717 (-)
gcdh gcdh,LOC102209187,LOC102794743,LOC101471797,LOC107718595 coding upstream 1171517 3654377 ~ 3675494 (-)
LOC103031051 NA coding upstream 1197638 3680498 ~ 3699508 (-)
G296987 NA non-coding downstream 254353 2227646 ~ 2228204 (-)
G296980 NA non-coding downstream 272678 2209670 ~ 2209879 (-)
G296978 NA non-coding downstream 282167 2200179 ~ 2200390 (-)
G296974 NA non-coding downstream 330410 2151918 ~ 2152147 (-)
G296972 NA non-coding downstream 343637 2138713 ~ 2138920 (-)
G297007 NA non-coding upstream 12257 2495117 ~ 2495708 (-)
G297009 NA non-coding upstream 22976 2505836 ~ 2506158 (-)
G297032 NA non-coding upstream 166552 2649412 ~ 2659222 (-)
G297034 NA non-coding upstream 182938 2665798 ~ 2682493 (-)
G297038 NA non-coding upstream 209160 2692020 ~ 2692576 (-)
LOC111191047 NA other downstream 624735 1845913 ~ 1857822 (-)
LOC107197178 syngr1a,LOC108413620,LOC107582870,LOC107694963,LOC107727456,LOC107684634,LOC107725053,LOC107590782 other downstream 1093848 1371515 ~ 1388709 (-)
LOC103037146 NA other upstream 14355 2497215 ~ 2531502 (-)
G297195 kpna2,LOC108432045,LOC108261381 other upstream 741347 3224207 ~ 3227171 (-)
G297334 farsa,LOC106601350 other upstream 1113627 3596487 ~ 3610695 (-)
elof1 elof1,LOC101167459 other upstream 1869755 4352615 ~ 4355768 (-)
G297720 NA other upstream 1882717 4365577 ~ 4366130 (-)

Expression


Co-expression Network