LOC103037146


Basic Information

Item Value
gene id LOC103037146
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172828.1
NCBI id APWO02000046.1
chromosome length 5964967
location 2497215 ~ 2531502 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU408397
gagtcttttgtatctGTGTCATCCGTATTTGCGTGTACCAGTTTTGTAGTTTGTGTTCCTAGAATCTGTTTCTTCAGTCCAGGTCTGTTTTGTTAAgATCAGTGCGGTACAGGAAACACACTCAAGAAGTCAGTGGAGTAAACGTGTCAGTCATTTACAGAAAGGCTTCCATCAGCAATCGAGAGGTGGACCGAGGAATGTCTCTGCCGACGTGTGGCGTATCGATCTGTCGGACTCCCTCATGTGGAACCAAAAatctTGACAGCCTAAATGTGGATTTTCGTGACTCAAACCCTACTAGATCCTGCATGtCTACAATCAGAGTGACCAGAATTTCTGTCAGAACCCTGGAGAACAAGATGTTCACTGTGTGTTTGGACAAGGACTCACAGAAAAccttcaaaaatgttaaaagCATAGAGGTGTTTCCCTGCACAGACCCGGGATATTGTCTTCAGAGGACCAAGTCCAGACACTCTGCAGAGGATGAGGACTCGGGACTGAGCAGATTTCTGAACAGGACTTTCTCTTTACCCATCAACACCTTCTCCGGAGCTCTACAGTGACGATAACGGACACTTCCGTCACTGATACGAACTCTGCTGCCGAAGAAACTGACTGGTTCAAatgatacaggtgca
>XM_022665102.1
GACAGCAGATAAACTGGTGTGTTCCCCCGACGCCTCTAGAAACACACACTCTAGCTCTGCACAGACTCTGAGTGTCTGAATGAGGAAGAGGCGGCTTACTGACAGTGACCTCGATGCGACGCTGCTTTACTGGCAGCTGGATTTTGAAGGTATTTAGAAGCTGCTGGACTGGAATTAAACATTGCTGCTTCAGTAAAGGTGCAAAGTCATTGGTGTCAACATCTCACTCATGTCCTTCATGTCATGTGGAGCTCGTGTTAAGCATCAGAGCCCTGATGGAAAAAGACGTGGGTGCCATGTCTTCAGCTGTAGAGTCTAACCTCTATCGCCAGTTACACGCCATCCTCAGAGAACTGGACACTGACACTCAAGCCGGATCATCCTGCAATAAAGGGATGCTGAGATGGACTCTACATAAGAAGGTGGAGAACAATCCCTCTACTAGTGTCTCTCTGTTGAAGGTGCTTGTTAAGGAGCTTGAAAAGgcggACAGGTTTGACTGTAAAGTTCGCATGATCCCTTTGCTGCACACATTAGCCTACACGGTTATTCAATCTGCTTATGTTCCAGAAGACCTAATCCAGAGAATCTACGTCTGTCTGAAACAGCTAGTGACACTACCCGAGCCTTACTGCACTATCGGCCTCAACTATGCTAAACTCATGAAACTGGAGCTCAACATACCAGGAGCTTTGTTCCAAAGGCGAGTGATTGCTGAGCACAGCCTAAAGAATGAACACTATCCTCTACAAGAAAGggtgtttgtgtttgtggacCCGGCCGTGTTTCCTCAGGCTCTGCTGAACGCCGTTAGGGCTGATGTGAAGTGTGGAGCCTCGGATTGGGACACGACGAGCCACCAGCGCCGAGTCCTGCTGCACACTCTGCAGGCTGGACTGGGGAGGCACTGCCACGGACGACAGCTTGCAGAGGCCTTGAAGGAATGTGGTAATATAGAGAAATACTTCCATGATGTGGTGACCACTGTAGAGGAGAGAATAGAAGACGGAGGATCAGACAGTGACCAATACAGCACCCGATTACAGCAGCTCTACCATGATATCTTCTCCTCTGTAggaaaagATCAGTCCAGTCCCAGCAGTCTGGTGGGAAGTCCACTCCCCAGTCCTGAGATCAGCTTCCATGTCTGGACAAAGGATGATGAGATATGGAACGAGTTGGTTAACTTTGCTCTGATGGTAAACCCTGAGGAACAGAGCTCCACATTCTTAGATGAGGATGATACAGCCAAACGAGCTTCCTGTATCTCCACCATGTCAGTAGACAGCGGCATAGAGGGAGACCTGCCTCTAAGCGAGCTGGCGTCTCTGATGGTGGAGCCCCCTGCTGAGTCGGAGGTGCTGGAACAGAAGAGAATGTCGCAGTTCTACAGGAGGGCGTGTGTACGGTGGCCTAGGGCTGGGAACAGAATGACTCTAATGATGGAGGCCATTAAGGAGATTGGAGGAACGGCTGGAGGAGGAAGCTCCCTGCCGAAGGAGGAGAAGACCTTCACAGCTCGTATCGTTGTCATGGGTGATGATAGCACTTTGGGCAGACTGGGCAGGGCCTATTACAATATACGAAAGAGGGAGGCACGCCATCTTTTTCTGACAAAAAGGGTCAACTTGGAAATTTACTACATTCCAGTCTCTAGCCAGTCTGTCACAACCTCTCCTGTTCAGgaaattgTTCCAGGACTTGTAGATATGCTTACAATAGCAGCATGTTTGGGAAAAGCAGACCCGTGGTATGACTGCAACATCAGCAGTCTGGGAGGCATGATCCTGAAATTTGCTGAAATGCACTCCAGTGTTGGTGGATCTTCAGAGCAAAATTCCTTTCTTCAGGATATTATCTCATACTACACGCGCACAGCACAGCAGCCCATCAGCATCCCCATCTTTTTAGTTAAGATGACATTTTCTAACGCAGACTCTAAAGCTGTGGAGGAGGTGTTTGTGTGTCAGCTGGACATTGACTTCCCTGGATTCAGGCCTTTCAGAGCTACCTTTAAAGATACAATTAAAGgATCAGTGCGGTACAGGAAACACACTCAAGAAGTCAGTGGAGTAAACGTGTCAGTCATTTACAGAAAGGCTTCCATCAGCAATCGAGAGGTGGACCGAGGAATGTCTCTGCCGACGTGTGGCGTATCGATCTGTCGGACTCCCTCATGTGGAACCAAAAatctTGACAGCCTAAATGTGGATTTTCGTGACTCAAACCCTACTAGATCCTGCATGtCTACAATCAGAGTGACCAGAATTTCTGTCAGAACCCTGGAGAACAAGATGTTCACTGTGTGTTTGGACAAGGACTCACAGAAAAccttcaaaaatgttaaaagCATAGAGGTGTTTCCCTGCACAGACCCGGGATATTGTCTTCAGAGGACCAAGTCCAGACACTCTGCAGAGGATGAGGACTCGGGACTGAGCAGATTTCTGAACAGGACTTTCTCTTTACCCATCAACACCTTCTCCGGAGCTCTACAGTGACGATAACGGACACTTCCGTCACTGATACGAACTCTGCTGCCGAAGAAACTGACTGGTTCAAatgatacaggtgcatctaaaaaaaatgagaatatcattgaaaagttactttatttcagtaattcagttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU408397 False 641 TUCP 0.46 6 2497270 2501451
XM_022665102.1 True 2631 mRNA 0.48 20 2497215 2531502

Neighbor

gene id symbol gene type direction distance location
mfsd6l NA coding downstream 3440 2489837 ~ 2493775 (-)
trnas-gcu_70 NA coding downstream 200688 2296446 ~ 2296527 (-)
trnas-gcu_69 NA coding downstream 200907 2296227 ~ 2296308 (-)
trnas-gcu_68 NA coding downstream 201126 2296008 ~ 2296089 (-)
trnas-gcu_67 NA coding downstream 201345 2295789 ~ 2295870 (-)
LOC111191031 NA coding upstream 412348 2943850 ~ 2945114 (-)
LOC103026382 LOC108432046,LOC107719342,LOC107602308,LOC107672125,LOC107672690 coding upstream 514728 3046230 ~ 3060717 (-)
gcdh gcdh,LOC102209187,LOC102794743,LOC101471797,LOC107718595 coding upstream 1122875 3654377 ~ 3675494 (-)
LOC103031051 NA coding upstream 1148996 3680498 ~ 3699508 (-)
LOC111191029 NA coding upstream 1236293 3767795 ~ 3781254 (-)
G297007 NA non-coding downstream 1507 2495117 ~ 2495708 (-)
G296998 NA non-coding downstream 14355 2482557 ~ 2482860 (-)
G296987 NA non-coding downstream 269011 2227646 ~ 2228204 (-)
G296980 NA non-coding downstream 287336 2209670 ~ 2209879 (-)
G296978 NA non-coding downstream 296825 2200179 ~ 2200390 (-)
G297032 NA non-coding upstream 117910 2649412 ~ 2659222 (-)
G297034 NA non-coding upstream 134296 2665798 ~ 2682493 (-)
G297038 NA non-coding upstream 160518 2692020 ~ 2692576 (-)
G297039 NA non-coding upstream 165578 2697080 ~ 2697405 (-)
G297087 NA non-coding upstream 191321 2722823 ~ 2723154 (-)
LOC111191047 NA other downstream 639393 1845913 ~ 1857822 (-)
LOC107197178 syngr1a,LOC108413620,LOC107582870,LOC107694963,LOC107727456,LOC107684634,LOC107725053,LOC107590782 other downstream 1108506 1371515 ~ 1388709 (-)
G297195 kpna2,LOC108432045,LOC108261381 other upstream 692705 3224207 ~ 3227171 (-)
G297334 farsa,LOC106601350 other upstream 1064985 3596487 ~ 3610695 (-)
elof1 elof1,LOC101167459 other upstream 1821113 4352615 ~ 4355768 (-)
G297720 NA other upstream 1834075 4365577 ~ 4366130 (-)
LOC103025426 zgc:158403,LOC108441004,LOC108258290,LOC107718630,LOC107661656,LOC107553678,LOC107695678 other upstream 2543989 5075491 ~ 5112720 (-)

Expression


Co-expression Network